Experiment: MoLS4 with Chlorite 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1609 and DvMF_1610 are separated by 83 nucleotides DvMF_1610 and DvMF_1611 are separated by 4 nucleotides DvMF_1611 and DvMF_1612 overlap by 11 nucleotides
DvMF_1609: DvMF_1609 - cytoplasmic chaperone TorD family protein (RefSeq), at 1,981,997 to 1,982,851
_1609
DvMF_1610: DvMF_1610 - anaerobic dimethyl sulfoxide reductase subunit C (RefSeq), at 1,982,935 to 1,983,810
_1610
DvMF_1611: DvMF_1611 - dimethylsulfoxide reductase, chain B (RefSeq), at 1,983,815 to 1,984,432
_1611
DvMF_1612: DvMF_1612 - anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family (RefSeq), at 1,984,422 to 1,986,884
_1612
Position (kb)
1982
1983
1984 Strain fitness (log2 ratio)
-2
-1
0
1 at 1981.962 kb on + strand at 1982.168 kb on + strand, within DvMF_1609 at 1982.277 kb on - strand, within DvMF_1609 at 1982.750 kb on + strand, within DvMF_1609 at 1982.866 kb on - strand at 1982.916 kb on + strand at 1982.958 kb on + strand at 1983.020 kb on + strand at 1983.168 kb on + strand, within DvMF_1610 at 1983.246 kb on - strand, within DvMF_1610 at 1983.253 kb on - strand, within DvMF_1610 at 1983.377 kb on + strand, within DvMF_1610 at 1983.470 kb on + strand, within DvMF_1610 at 1983.588 kb on - strand, within DvMF_1610 at 1983.933 kb on + strand, within DvMF_1611 at 1983.975 kb on + strand, within DvMF_1611 at 1984.078 kb on - strand, within DvMF_1611 at 1984.103 kb on - strand, within DvMF_1611 at 1984.336 kb on - strand, within DvMF_1611 at 1984.349 kb on + strand, within DvMF_1611 at 1984.389 kb on + strand at 1984.417 kb on - strand at 1984.492 kb on + strand at 1984.500 kb on - strand at 1984.572 kb on + strand at 1984.734 kb on - strand, within DvMF_1612 at 1984.775 kb on - strand, within DvMF_1612 at 1984.784 kb on + strand, within DvMF_1612 at 1984.784 kb on + strand, within DvMF_1612
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorite 12.5 mM remove 1,981,962 + +0.0 1,982,168 + DvMF_1609 0.20 -0.5 1,982,277 - DvMF_1609 0.33 -0.5 1,982,750 + DvMF_1609 0.88 -0.3 1,982,866 - -0.2 1,982,916 + -0.2 1,982,958 + -1.8 1,983,020 + -1.1 1,983,168 + DvMF_1610 0.27 -0.6 1,983,246 - DvMF_1610 0.36 -0.9 1,983,253 - DvMF_1610 0.36 -0.0 1,983,377 + DvMF_1610 0.50 -0.9 1,983,470 + DvMF_1610 0.61 -1.3 1,983,588 - DvMF_1610 0.75 -0.8 1,983,933 + DvMF_1611 0.19 +0.1 1,983,975 + DvMF_1611 0.26 -0.9 1,984,078 - DvMF_1611 0.43 -0.5 1,984,103 - DvMF_1611 0.47 -0.9 1,984,336 - DvMF_1611 0.84 -0.3 1,984,349 + DvMF_1611 0.86 -0.0 1,984,389 + -1.2 1,984,417 - -0.2 1,984,492 + -0.3 1,984,500 - -0.5 1,984,572 + +0.3 1,984,734 - DvMF_1612 0.13 -0.9 1,984,775 - DvMF_1612 0.14 -0.4 1,984,784 + DvMF_1612 0.15 -0.2 1,984,784 + DvMF_1612 0.15 -0.2
Or see this region's nucleotide sequence