Experiment: MoLS4 with Chlorite 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1126 and DvMF_1127 are separated by 4 nucleotides DvMF_1127 and DvMF_1128 are separated by 174 nucleotides DvMF_1128 and DvMF_1129 are separated by 55 nucleotides
DvMF_1126: DvMF_1126 - FAD dependent oxidoreductase (RefSeq), at 1,382,807 to 1,383,985
_1126
DvMF_1127: DvMF_1127 - succinate dehydrogenase and fumarate reductase iron-sulfur protein (RefSeq), at 1,383,990 to 1,384,883
_1127
DvMF_1128: DvMF_1128 - YbaK/prolyl-tRNA synthetase associated region (RefSeq), at 1,385,058 to 1,385,573
_1128
DvMF_1129: DvMF_1129 - two component transcriptional regulator, LuxR family (RefSeq), at 1,385,629 to 1,386,324
_1129
Position (kb)
1383
1384
1385 Strain fitness (log2 ratio)
-1
0
1 at 1383.150 kb on + strand, within DvMF_1126 at 1383.315 kb on + strand, within DvMF_1126 at 1383.643 kb on - strand, within DvMF_1126 at 1383.861 kb on + strand, within DvMF_1126 at 1383.867 kb on - strand, within DvMF_1126 at 1384.099 kb on + strand, within DvMF_1127 at 1384.168 kb on + strand, within DvMF_1127 at 1384.237 kb on - strand, within DvMF_1127 at 1384.296 kb on + strand, within DvMF_1127 at 1384.302 kb on + strand, within DvMF_1127 at 1384.317 kb on - strand, within DvMF_1127 at 1384.347 kb on - strand, within DvMF_1127 at 1384.505 kb on - strand, within DvMF_1127 at 1384.573 kb on + strand, within DvMF_1127 at 1384.830 kb on - strand at 1384.841 kb on - strand at 1384.850 kb on - strand at 1385.002 kb on - strand at 1385.116 kb on - strand, within DvMF_1128 at 1385.116 kb on - strand, within DvMF_1128 at 1385.116 kb on - strand, within DvMF_1128 at 1385.221 kb on - strand, within DvMF_1128 at 1385.221 kb on - strand, within DvMF_1128 at 1385.576 kb on - strand at 1385.637 kb on + strand at 1385.640 kb on - strand at 1385.824 kb on + strand, within DvMF_1129
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Chlorite 12.5 mM remove 1,383,150 + DvMF_1126 0.29 -0.7 1,383,315 + DvMF_1126 0.43 -0.3 1,383,643 - DvMF_1126 0.71 -1.4 1,383,861 + DvMF_1126 0.89 -0.5 1,383,867 - DvMF_1126 0.90 +0.7 1,384,099 + DvMF_1127 0.12 -0.5 1,384,168 + DvMF_1127 0.20 +0.2 1,384,237 - DvMF_1127 0.28 -0.4 1,384,296 + DvMF_1127 0.34 -0.3 1,384,302 + DvMF_1127 0.35 -0.2 1,384,317 - DvMF_1127 0.37 -0.2 1,384,347 - DvMF_1127 0.40 -0.3 1,384,505 - DvMF_1127 0.58 +0.8 1,384,573 + DvMF_1127 0.65 -0.3 1,384,830 - +0.1 1,384,841 - -1.5 1,384,850 - -0.2 1,385,002 - -0.3 1,385,116 - DvMF_1128 0.11 -0.3 1,385,116 - DvMF_1128 0.11 -0.8 1,385,116 - DvMF_1128 0.11 -0.2 1,385,221 - DvMF_1128 0.32 -0.1 1,385,221 - DvMF_1128 0.32 -0.3 1,385,576 - -0.1 1,385,637 + -0.3 1,385,640 - -0.4 1,385,824 + DvMF_1129 0.28 -0.4
Or see this region's nucleotide sequence