Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.3722.1
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X |
|---|---|---|---|---|---|
| remove | |||||
| 3,600,279 | - | Xcc-8004.3721.1 | 0.65 | -0.9 | |
| 3,600,406 | + | Xcc-8004.3721.1 | 0.81 | +0.7 | |
| 3,600,407 | - | Xcc-8004.3721.1 | 0.81 | -1.7 | |
| 3,600,691 | - | Xcc-8004.3722.1 | 0.25 | -0.9 | |
| 3,601,111 | + | -1.0 | |||
| 3,601,112 | - | +0.2 | |||
| 3,601,678 | + | Xcc-8004.3723.1 | 0.46 | -0.7 | |
| 3,601,678 | + | Xcc-8004.3723.1 | 0.46 | -0.6 | |
| 3,601,678 | + | Xcc-8004.3723.1 | 0.46 | -1.1 | |
| 3,601,679 | - | Xcc-8004.3723.1 | 0.46 | -1.5 |
Or see this region's nucleotide sequence