Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.2343.1

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
2,290,951	+		Xcc-8004.2342.1	0.87	+0.5
2,290,958	-		Xcc-8004.2342.1	0.87	+1.1
2,291,223	+				-1.2
2,291,223	+				+0.3
2,291,223	+				-0.1
2,291,224	-				-0.9
2,291,224	-				-0.1
2,291,224	-				-0.9
2,291,224	-				-1.7
2,291,224	-				+0.1
2,291,224	-				+0.6
2,291,246	-				+1.0
2,291,269	-				-0.6
2,291,269	-				+0.8
2,291,269	-				+1.2
2,291,269	-				-0.4
2,291,269	-				-0.2
2,291,269	-				+0.3
2,291,376	-		Xcc-8004.2343.1	0.10	+0.1
2,291,407	+		Xcc-8004.2343.1	0.17	+0.8
2,291,407	+		Xcc-8004.2343.1	0.17	+1.1
2,291,408	-		Xcc-8004.2343.1	0.17	+1.8
2,291,408	-		Xcc-8004.2343.1	0.17	+0.1
2,291,675	-		Xcc-8004.2343.1	0.76	-0.5
2,291,681	-		Xcc-8004.2343.1	0.77	+1.1
2,291,923	-		Xcc-8004.2344.1	0.82	+1.4
2,292,518	+		Xcc-8004.2345.1	0.76	+1.1
2,292,519	-		Xcc-8004.2345.1	0.76	+0.8
2,292,615	-		Xcc-8004.2345.1	0.89	+1.5
2,292,721	-				-0.4