Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.155.1

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
143,748	+				+2.4
143,748	+				-0.5
143,748	+				-0.2
143,799	+				-0.1
143,799	+				+0.8
143,799	+				-0.8
143,799	+				-0.6
143,799	+				-0.2
143,800	-				+1.4
143,800	-				+1.3
143,800	-				+0.1
143,800	-				-0.3
143,872	+				-1.3
143,873	-				-0.8
144,067	+		Xcc-8004.155.1	0.71	+0.4
144,150	+				+0.4
144,176	+				+0.4
144,176	+				+2.1
144,214	-				+0.7
144,437	+		Xcc-8004.156.1	0.17	+0.6
144,438	-		Xcc-8004.156.1	0.17	-0.7
144,453	+		Xcc-8004.156.1	0.18	+0.2
144,453	+		Xcc-8004.156.1	0.18	+0.2
144,453	+		Xcc-8004.156.1	0.18	-0.1
144,454	-		Xcc-8004.156.1	0.18	-1.8
144,487	+		Xcc-8004.156.1	0.21	+0.1
144,488	-		Xcc-8004.156.1	0.21	-1.2
144,530	+		Xcc-8004.156.1	0.24	-1.3
144,545	+		Xcc-8004.156.1	0.26	-0.2
144,546	-		Xcc-8004.156.1	0.26	-1.3
144,546	-		Xcc-8004.156.1	0.26	-0.3
144,581	+		Xcc-8004.156.1	0.29	+0.4
144,581	+		Xcc-8004.156.1	0.29	-0.7
144,582	-		Xcc-8004.156.1	0.29	-0.6
144,704	+		Xcc-8004.156.1	0.38	+0.3
144,704	+		Xcc-8004.156.1	0.38	-0.9