Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.1177.1

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X
1,109,827	+		Xcc-8004.1175.1	0.30	+0.4
1,109,828	-		Xcc-8004.1175.1	0.31	-0.4
1,109,828	-		Xcc-8004.1175.1	0.31	+0.8
1,109,828	-		Xcc-8004.1175.1	0.31	+0.0
1,109,878	+		Xcc-8004.1175.1	0.38	-0.2
1,109,878	+		Xcc-8004.1175.1	0.38	+0.9
1,109,902	+		Xcc-8004.1175.1	0.41	+0.1
1,109,902	+		Xcc-8004.1175.1	0.41	+0.5
1,109,903	-		Xcc-8004.1175.1	0.42	-0.3
1,109,903	-		Xcc-8004.1175.1	0.42	+0.9
1,109,915	-		Xcc-8004.1175.1	0.43	-1.7
1,109,929	+		Xcc-8004.1175.1	0.45	+0.3
1,110,291	-				+0.8
1,110,293	+				-0.2
1,110,293	+				-0.3
1,110,293	+				+0.7
1,110,293	+				-0.9
1,110,293	+				-1.2
1,110,293	+				-0.7
1,110,293	+				-0.2
1,110,294	-				-0.2
1,110,294	-				-0.4
1,110,294	-				+0.4
1,110,294	-				-0.7
1,110,294	-				-0.1
1,110,294	-				+0.6
1,110,294	-				-2.0
1,110,381	+				+1.7
1,110,381	+				+0.1
1,110,381	+				-1.6
1,110,381	+				+0.4
1,110,382	-				-0.7
1,110,382	-				-0.7
1,110,403	+				+1.3
1,111,624	+				+2.8
1,111,683	-				-0.3
1,111,699	+				-0.0
1,111,712	+				-1.1
1,111,712	+				+1.0
1,111,712	+				+1.5
1,111,712	+				-0.6
1,111,713	-				-1.0