Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04355 and H281DRAFT_04356 are separated by 83 nucleotides H281DRAFT_04356 and H281DRAFT_04357 are separated by 4 nucleotides H281DRAFT_04357 and H281DRAFT_04358 are separated by 35 nucleotides
H281DRAFT_04355: H281DRAFT_04355 - RNA polymerase, sigma-24 subunit, RpoE, at 72,044 to 72,643
_04355
H281DRAFT_04356: H281DRAFT_04356 - anti sigma-E protein, RseA, at 72,727 to 73,341
_04356
H281DRAFT_04357: H281DRAFT_04357 - sigma E regulatory protein, MucB/RseB, at 73,346 to 74,389
_04357
H281DRAFT_04358: H281DRAFT_04358 - serine protease Do, at 74,425 to 75,951
_04358
Position (kb) 73
74
75 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 72.677 kb on + strand at 72.677 kb on + strand at 72.686 kb on + strand at 72.686 kb on + strand at 72.711 kb on + strand at 72.711 kb on + strand at 72.711 kb on + strand at 72.712 kb on - strand at 72.712 kb on - strand at 72.878 kb on - strand, within H281DRAFT_04356 at 73.084 kb on - strand, within H281DRAFT_04356 at 73.247 kb on - strand, within H281DRAFT_04356 at 73.339 kb on + strand at 73.339 kb on + strand at 73.340 kb on - strand at 73.340 kb on - strand at 73.369 kb on - strand at 73.369 kb on - strand at 73.376 kb on - strand at 73.429 kb on + strand at 73.547 kb on + strand, within H281DRAFT_04357 at 73.589 kb on + strand, within H281DRAFT_04357 at 73.678 kb on + strand, within H281DRAFT_04357 at 73.678 kb on + strand, within H281DRAFT_04357 at 73.781 kb on + strand, within H281DRAFT_04357 at 73.781 kb on + strand, within H281DRAFT_04357 at 73.872 kb on - strand, within H281DRAFT_04357 at 74.012 kb on - strand, within H281DRAFT_04357 at 74.283 kb on + strand, within H281DRAFT_04357 at 74.283 kb on + strand, within H281DRAFT_04357 at 74.283 kb on + strand, within H281DRAFT_04357 at 74.283 kb on + strand, within H281DRAFT_04357 at 74.284 kb on - strand, within H281DRAFT_04357 at 74.284 kb on - strand, within H281DRAFT_04357 at 74.284 kb on - strand, within H281DRAFT_04357 at 74.286 kb on + strand at 74.315 kb on - strand at 74.367 kb on + strand at 74.367 kb on + strand at 74.368 kb on - strand at 74.368 kb on - strand at 74.372 kb on + strand at 74.372 kb on + strand at 74.372 kb on + strand at 74.373 kb on - strand at 74.373 kb on - strand at 74.388 kb on - strand at 74.842 kb on + strand, within H281DRAFT_04358 at 74.843 kb on - strand, within H281DRAFT_04358 at 74.887 kb on + strand, within H281DRAFT_04358 at 74.887 kb on + strand, within H281DRAFT_04358 at 74.887 kb on + strand, within H281DRAFT_04358 at 74.887 kb on + strand, within H281DRAFT_04358 at 74.888 kb on - strand, within H281DRAFT_04358 at 75.144 kb on - strand, within H281DRAFT_04358 at 75.197 kb on + strand, within H281DRAFT_04358 at 75.197 kb on + strand, within H281DRAFT_04358 at 75.220 kb on + strand, within H281DRAFT_04358 at 75.220 kb on + strand, within H281DRAFT_04358 at 75.220 kb on + strand, within H281DRAFT_04358 at 75.240 kb on + strand, within H281DRAFT_04358 at 75.241 kb on - strand, within H281DRAFT_04358
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 72,677 + -0.7 72,677 + -1.3 72,686 + +0.9 72,686 + +1.0 72,711 + +2.8 72,711 + +0.6 72,711 + +1.6 72,712 - +1.2 72,712 - +3.0 72,878 - H281DRAFT_04356 0.25 +1.4 73,084 - H281DRAFT_04356 0.58 +2.3 73,247 - H281DRAFT_04356 0.85 +0.6 73,339 + +1.0 73,339 + -1.3 73,340 - +1.7 73,340 - +0.8 73,369 - +0.9 73,369 - +0.7 73,376 - +1.2 73,429 + +2.7 73,547 + H281DRAFT_04357 0.19 +1.3 73,589 + H281DRAFT_04357 0.23 +1.9 73,678 + H281DRAFT_04357 0.32 +0.1 73,678 + H281DRAFT_04357 0.32 +2.4 73,781 + H281DRAFT_04357 0.42 +0.9 73,781 + H281DRAFT_04357 0.42 -2.0 73,872 - H281DRAFT_04357 0.50 +2.1 74,012 - H281DRAFT_04357 0.64 +1.5 74,283 + H281DRAFT_04357 0.90 +1.1 74,283 + H281DRAFT_04357 0.90 +1.2 74,283 + H281DRAFT_04357 0.90 +1.7 74,283 + H281DRAFT_04357 0.90 +1.9 74,284 - H281DRAFT_04357 0.90 +2.1 74,284 - H281DRAFT_04357 0.90 +1.5 74,284 - H281DRAFT_04357 0.90 +1.3 74,286 + +1.5 74,315 - +2.7 74,367 + +0.9 74,367 + +1.0 74,368 - +1.4 74,368 - +2.7 74,372 + +0.3 74,372 + -2.6 74,372 + -1.8 74,373 - +0.0 74,373 - +0.7 74,388 - -0.0 74,842 + H281DRAFT_04358 0.27 -1.5 74,843 - H281DRAFT_04358 0.27 -0.4 74,887 + H281DRAFT_04358 0.30 -0.9 74,887 + H281DRAFT_04358 0.30 +1.1 74,887 + H281DRAFT_04358 0.30 +0.3 74,887 + H281DRAFT_04358 0.30 -3.8 74,888 - H281DRAFT_04358 0.30 -1.6 75,144 - H281DRAFT_04358 0.47 -0.7 75,197 + H281DRAFT_04358 0.51 -0.3 75,197 + H281DRAFT_04358 0.51 -1.2 75,220 + H281DRAFT_04358 0.52 -0.7 75,220 + H281DRAFT_04358 0.52 -0.8 75,220 + H281DRAFT_04358 0.52 -1.0 75,240 + H281DRAFT_04358 0.53 +1.2 75,241 - H281DRAFT_04358 0.53 +0.8
Or see this region's nucleotide sequence