Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04126 and H281DRAFT_04127 overlap by 4 nucleotides H281DRAFT_04127 and H281DRAFT_04128 are separated by 76 nucleotides H281DRAFT_04128 and H281DRAFT_04129 are separated by 41 nucleotides H281DRAFT_04129 and H281DRAFT_04130 overlap by 19 nucleotides
H281DRAFT_04126: H281DRAFT_04126 - integrase/recombinase XerD, at 237,404 to 238,357
_04126
H281DRAFT_04127: H281DRAFT_04127 - methylated-DNA-[protein]-cysteine S-methyltransferase, at 238,354 to 238,824
_04127
H281DRAFT_04128: H281DRAFT_04128 - epoxyqueuosine reductase, at 238,901 to 240,124
_04128
H281DRAFT_04129: H281DRAFT_04129 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 240,166 to 240,738
_04129
H281DRAFT_04130: H281DRAFT_04130 - N-acetylmuramoyl-L-alanine amidase, at 240,720 to 242,333
_04130
Position (kb) 238
239
240
241 Strain fitness (log2 ratio) -1
0
1
2
3 at 238.491 kb on - strand, within H281DRAFT_04127 at 238.491 kb on - strand, within H281DRAFT_04127 at 238.491 kb on - strand, within H281DRAFT_04127 at 238.556 kb on + strand, within H281DRAFT_04127 at 238.557 kb on - strand, within H281DRAFT_04127 at 238.670 kb on + strand, within H281DRAFT_04127 at 238.670 kb on + strand, within H281DRAFT_04127 at 238.745 kb on + strand, within H281DRAFT_04127 at 238.861 kb on + strand at 238.861 kb on + strand at 238.861 kb on + strand at 238.861 kb on + strand at 238.861 kb on + strand at 238.861 kb on + strand at 238.862 kb on - strand at 238.862 kb on - strand at 238.862 kb on - strand at 238.979 kb on + strand at 239.316 kb on + strand, within H281DRAFT_04128 at 239.317 kb on - strand, within H281DRAFT_04128 at 239.317 kb on - strand, within H281DRAFT_04128 at 239.346 kb on + strand, within H281DRAFT_04128 at 239.347 kb on - strand, within H281DRAFT_04128 at 239.527 kb on + strand, within H281DRAFT_04128 at 239.527 kb on + strand, within H281DRAFT_04128 at 239.527 kb on + strand, within H281DRAFT_04128 at 239.528 kb on - strand, within H281DRAFT_04128 at 239.679 kb on + strand, within H281DRAFT_04128 at 239.827 kb on - strand, within H281DRAFT_04128 at 239.910 kb on + strand, within H281DRAFT_04128 at 239.910 kb on + strand, within H281DRAFT_04128 at 239.910 kb on + strand, within H281DRAFT_04128
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 238,491 - H281DRAFT_04127 0.29 +2.8 238,491 - H281DRAFT_04127 0.29 +1.8 238,491 - H281DRAFT_04127 0.29 +1.1 238,556 + H281DRAFT_04127 0.43 +1.8 238,557 - H281DRAFT_04127 0.43 +2.8 238,670 + H281DRAFT_04127 0.67 +1.0 238,670 + H281DRAFT_04127 0.67 +0.9 238,745 + H281DRAFT_04127 0.83 +1.7 238,861 + +0.3 238,861 + +1.7 238,861 + +1.6 238,861 + +0.9 238,861 + +2.1 238,861 + +1.2 238,862 - +2.3 238,862 - +2.6 238,862 - +2.0 238,979 + -0.9 239,316 + H281DRAFT_04128 0.34 +1.1 239,317 - H281DRAFT_04128 0.34 +2.1 239,317 - H281DRAFT_04128 0.34 +1.1 239,346 + H281DRAFT_04128 0.36 +2.4 239,347 - H281DRAFT_04128 0.36 +2.1 239,527 + H281DRAFT_04128 0.51 +1.8 239,527 + H281DRAFT_04128 0.51 +1.1 239,527 + H281DRAFT_04128 0.51 +0.4 239,528 - H281DRAFT_04128 0.51 +2.5 239,679 + H281DRAFT_04128 0.64 -0.1 239,827 - H281DRAFT_04128 0.76 +2.4 239,910 + H281DRAFT_04128 0.82 +0.8 239,910 + H281DRAFT_04128 0.82 +0.5 239,910 + H281DRAFT_04128 0.82 +2.4
Or see this region's nucleotide sequence