Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03484 and H281DRAFT_03485 are separated by 2 nucleotides H281DRAFT_03485 and H281DRAFT_03486 overlap by 4 nucleotides H281DRAFT_03486 and H281DRAFT_03487 are separated by 36 nucleotides
H281DRAFT_03484: H281DRAFT_03484 - osmoprotectant transport system permease protein, at 568,957 to 569,682
_03484
H281DRAFT_03485: H281DRAFT_03485 - osmoprotectant transport system ATP-binding protein, at 569,685 to 570,803
_03485
H281DRAFT_03486: H281DRAFT_03486 - osmoprotectant transport system permease protein, at 570,800 to 571,519
_03486
H281DRAFT_03487: H281DRAFT_03487 - osmoprotectant transport system substrate-binding protein, at 571,556 to 572,452
_03487
Position (kb) 569
570
571 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 568.900 kb on - strand at 569.021 kb on + strand at 569.119 kb on + strand, within H281DRAFT_03484 at 569.120 kb on - strand, within H281DRAFT_03484 at 569.270 kb on - strand at 569.441 kb on - strand, within H281DRAFT_03484 at 569.442 kb on + strand, within H281DRAFT_03484 at 569.630 kb on + strand at 570.257 kb on + strand, within H281DRAFT_03485 at 570.258 kb on - strand, within H281DRAFT_03485 at 570.653 kb on + strand, within H281DRAFT_03485 at 570.713 kb on + strand at 570.714 kb on - strand at 570.806 kb on - strand at 570.990 kb on - strand, within H281DRAFT_03486 at 571.101 kb on + strand, within H281DRAFT_03486 at 571.251 kb on + strand, within H281DRAFT_03486 at 571.315 kb on + strand, within H281DRAFT_03486 at 571.624 kb on + strand at 571.704 kb on + strand, within H281DRAFT_03487
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 568,900 - +2.1 569,021 + -2.3 569,119 + H281DRAFT_03484 0.22 -1.4 569,120 - H281DRAFT_03484 0.22 -0.5 569,270 - +0.1 569,441 - H281DRAFT_03484 0.67 -1.3 569,442 + H281DRAFT_03484 0.67 -0.5 569,630 + -0.1 570,257 + H281DRAFT_03485 0.51 +0.1 570,258 - H281DRAFT_03485 0.51 +1.3 570,653 + H281DRAFT_03485 0.87 +0.9 570,713 + -1.6 570,714 - -0.7 570,806 - +0.5 570,990 - H281DRAFT_03486 0.26 +0.6 571,101 + H281DRAFT_03486 0.42 -3.7 571,251 + H281DRAFT_03486 0.63 -0.7 571,315 + H281DRAFT_03486 0.72 -1.1 571,624 + +0.2 571,704 + H281DRAFT_03487 0.16 +0.8
Or see this region's nucleotide sequence