Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03382 and H281DRAFT_03383 overlap by 4 nucleotides H281DRAFT_03383 and H281DRAFT_03384 overlap by 4 nucleotides H281DRAFT_03384 and H281DRAFT_03385 are separated by 84 nucleotides
H281DRAFT_03382: H281DRAFT_03382 - CO or xanthine dehydrogenase, Mo-binding subunit, at 448,497 to 450,761
_03382
H281DRAFT_03383: H281DRAFT_03383 - Aerobic-type carbon monoxide dehydrogenase, small subunit, CoxS/CutS family, at 450,758 to 451,270
_03383
H281DRAFT_03384: H281DRAFT_03384 - Cytochrome c, mono- and diheme variants, at 451,267 to 452,544
_03384
H281DRAFT_03385: H281DRAFT_03385 - NADPH2 dehydrogenase, at 452,629 to 453,771
_03385
Position (kb) 451
452
453 Strain fitness (log2 ratio) -1
0
1 at 450.525 kb on + strand, within H281DRAFT_03382 at 451.203 kb on + strand, within H281DRAFT_03383 at 451.204 kb on - strand, within H281DRAFT_03383 at 451.260 kb on - strand at 451.297 kb on - strand at 451.388 kb on + strand at 451.671 kb on - strand, within H281DRAFT_03384 at 452.610 kb on + strand at 452.790 kb on - strand, within H281DRAFT_03385 at 452.911 kb on - strand, within H281DRAFT_03385 at 452.966 kb on + strand, within H281DRAFT_03385 at 453.113 kb on - strand, within H281DRAFT_03385
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 450,525 + H281DRAFT_03382 0.90 -1.5 451,203 + H281DRAFT_03383 0.87 +0.9 451,204 - H281DRAFT_03383 0.87 +0.2 451,260 - -0.4 451,297 - +0.2 451,388 + +1.0 451,671 - H281DRAFT_03384 0.32 +0.8 452,610 + +0.9 452,790 - H281DRAFT_03385 0.14 -0.1 452,911 - H281DRAFT_03385 0.25 +0.0 452,966 + H281DRAFT_03385 0.29 -0.9 453,113 - H281DRAFT_03385 0.42 +0.8
Or see this region's nucleotide sequence