Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03285 and H281DRAFT_03286 overlap by 4 nucleotides H281DRAFT_03286 and H281DRAFT_03287 are separated by 110 nucleotides H281DRAFT_03287 and H281DRAFT_03288 are separated by 507 nucleotides
H281DRAFT_03285: H281DRAFT_03285 - lipopolysaccharide heptosyltransferase II, at 343,098 to 344,372
_03285
H281DRAFT_03286: H281DRAFT_03286 - D,D-heptose 1,7-bisphosphate phosphatase, at 344,369 to 344,974
_03286
H281DRAFT_03287: H281DRAFT_03287 - Glycosyltransferase involved in cell wall bisynthesis, at 345,085 to 346,380
_03287
H281DRAFT_03288: H281DRAFT_03288 - ATP-binding cassette, subfamily B, at 346,888 to 349,575
_03288
Position (kb) 345
346
347 Strain fitness (log2 ratio) -2
-1
0
1
2 at 344.957 kb on + strand at 345.177 kb on - strand at 345.177 kb on - strand at 345.177 kb on - strand at 345.532 kb on + strand, within H281DRAFT_03287 at 345.621 kb on - strand, within H281DRAFT_03287 at 346.214 kb on - strand, within H281DRAFT_03287 at 346.301 kb on + strand at 346.302 kb on - strand at 346.462 kb on + strand at 346.463 kb on - strand at 346.557 kb on - strand at 346.619 kb on + strand at 346.620 kb on - strand at 346.707 kb on - strand at 346.767 kb on + strand at 347.121 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 344,957 + -0.5 345,177 - -0.1 345,177 - +0.2 345,177 - -2.3 345,532 + H281DRAFT_03287 0.34 +2.6 345,621 - H281DRAFT_03287 0.41 +0.5 346,214 - H281DRAFT_03287 0.87 +0.3 346,301 + +0.5 346,302 - +0.3 346,462 + +0.5 346,463 - +0.4 346,557 - -0.4 346,619 + +1.2 346,620 - +0.2 346,707 - +0.2 346,767 + +0.1 347,121 - +0.9
Or see this region's nucleotide sequence