Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02440 and H281DRAFT_02441 overlap by 14 nucleotides H281DRAFT_02441 and H281DRAFT_02442 are separated by 646 nucleotides
H281DRAFT_02440: H281DRAFT_02440 - putative ABC transport system permease protein, at 1,412 to 3,985
_02440
H281DRAFT_02441: H281DRAFT_02441 - putative ABC transport system ATP-binding protein, at 3,972 to 4,721
_02441
H281DRAFT_02442: H281DRAFT_02442 - NADH dehydrogenase subunit M, at 5,368 to 6,921
_02442
Position (kb) 3
4
5 Strain fitness (log2 ratio) -1
0
1 at 3.383 kb on - strand, within H281DRAFT_02440 at 3.666 kb on - strand, within H281DRAFT_02440 at 3.721 kb on - strand, within H281DRAFT_02440 at 3.840 kb on + strand at 4.015 kb on + strand at 4.232 kb on + strand, within H281DRAFT_02441 at 4.799 kb on + strand at 4.799 kb on + strand at 4.800 kb on - strand at 4.914 kb on - strand at 5.150 kb on + strand at 5.151 kb on - strand at 5.208 kb on + strand at 5.246 kb on + strand at 5.292 kb on + strand at 5.293 kb on - strand at 5.296 kb on + strand at 5.297 kb on - strand at 5.297 kb on - strand at 5.344 kb on + strand at 5.385 kb on + strand at 5.386 kb on - strand at 5.394 kb on + strand at 5.395 kb on - strand at 5.461 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 3,383 - H281DRAFT_02440 0.77 -0.3 3,666 - H281DRAFT_02440 0.88 +0.2 3,721 - H281DRAFT_02440 0.90 -0.5 3,840 + +0.6 4,015 + -0.4 4,232 + H281DRAFT_02441 0.35 +1.0 4,799 + -1.4 4,799 + -0.3 4,800 - -0.6 4,914 - -0.9 5,150 + -0.0 5,151 - +0.7 5,208 + -0.1 5,246 + -1.0 5,292 + -0.1 5,293 - -0.4 5,296 + -1.3 5,297 - -0.0 5,297 - -0.4 5,344 + +0.6 5,385 + +0.0 5,386 - +1.0 5,394 + -0.2 5,395 - -1.2 5,461 - +0.1
Or see this region's nucleotide sequence