Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02321 and H281DRAFT_02322 are separated by 243 nucleotides H281DRAFT_02322 and H281DRAFT_02323 are separated by 90 nucleotides H281DRAFT_02323 and H281DRAFT_02324 are separated by 114 nucleotides H281DRAFT_02324 and H281DRAFT_02325 are separated by 150 nucleotides H281DRAFT_02325 and H281DRAFT_02326 are separated by 138 nucleotides
H281DRAFT_02321: H281DRAFT_02321 - Site-specific recombinase XerD, at 477,045 to 478,256
_02321
H281DRAFT_02322: H281DRAFT_02322 - hypothetical protein, at 478,500 to 478,661
_02322
H281DRAFT_02323: H281DRAFT_02323 - hypothetical protein, at 478,752 to 479,096
_02323
H281DRAFT_02324: H281DRAFT_02324 - pyruvate dehydrogenase E1 component, at 479,211 to 481,946
_02324
H281DRAFT_02325: H281DRAFT_02325 - transcriptional regulator, AsnC family, at 482,097 to 482,624
_02325
H281DRAFT_02326: H281DRAFT_02326 - histidine triad (HIT) family protein, at 482,763 to 483,188
_02326
Position (kb) 479
480
481
482 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 478.277 kb on + strand at 478.277 kb on + strand at 478.278 kb on - strand at 478.278 kb on - strand at 478.278 kb on - strand at 478.307 kb on + strand at 478.385 kb on + strand at 478.386 kb on - strand at 478.461 kb on - strand at 478.522 kb on - strand, within H281DRAFT_02322 at 478.522 kb on - strand, within H281DRAFT_02322 at 478.746 kb on + strand at 478.747 kb on - strand at 478.753 kb on + strand at 478.753 kb on + strand at 478.753 kb on + strand at 478.753 kb on + strand at 478.753 kb on + strand at 478.754 kb on - strand at 478.754 kb on - strand at 478.772 kb on + strand at 478.772 kb on + strand at 478.773 kb on - strand at 478.773 kb on - strand at 478.777 kb on + strand at 478.777 kb on + strand at 478.783 kb on + strand at 478.783 kb on + strand at 478.813 kb on + strand, within H281DRAFT_02323 at 478.814 kb on - strand, within H281DRAFT_02323 at 478.834 kb on + strand, within H281DRAFT_02323 at 478.840 kb on + strand, within H281DRAFT_02323 at 478.879 kb on + strand, within H281DRAFT_02323 at 478.879 kb on + strand, within H281DRAFT_02323 at 478.879 kb on + strand, within H281DRAFT_02323 at 478.895 kb on - strand, within H281DRAFT_02323 at 478.909 kb on + strand, within H281DRAFT_02323 at 478.924 kb on + strand, within H281DRAFT_02323 at 478.925 kb on - strand, within H281DRAFT_02323 at 479.002 kb on - strand, within H281DRAFT_02323 at 479.002 kb on - strand, within H281DRAFT_02323 at 479.085 kb on + strand at 479.086 kb on - strand at 479.151 kb on + strand at 479.151 kb on + strand at 479.151 kb on + strand at 479.152 kb on - strand at 479.167 kb on + strand at 479.178 kb on + strand at 479.178 kb on + strand at 479.179 kb on - strand at 479.307 kb on + strand at 479.431 kb on + strand at 479.432 kb on - strand at 479.464 kb on + strand at 479.518 kb on + strand, within H281DRAFT_02324 at 479.518 kb on + strand, within H281DRAFT_02324 at 479.518 kb on + strand, within H281DRAFT_02324 at 479.519 kb on - strand, within H281DRAFT_02324 at 479.675 kb on + strand, within H281DRAFT_02324 at 479.675 kb on + strand, within H281DRAFT_02324 at 479.676 kb on - strand, within H281DRAFT_02324 at 479.741 kb on - strand, within H281DRAFT_02324 at 479.741 kb on - strand, within H281DRAFT_02324 at 479.775 kb on + strand, within H281DRAFT_02324 at 479.775 kb on + strand, within H281DRAFT_02324 at 479.776 kb on - strand, within H281DRAFT_02324 at 479.776 kb on - strand, within H281DRAFT_02324 at 479.807 kb on - strand, within H281DRAFT_02324 at 479.830 kb on + strand, within H281DRAFT_02324 at 479.830 kb on + strand, within H281DRAFT_02324 at 479.831 kb on - strand, within H281DRAFT_02324 at 479.831 kb on - strand, within H281DRAFT_02324 at 479.834 kb on - strand at 479.834 kb on - strand, within H281DRAFT_02324 at 479.834 kb on - strand, within H281DRAFT_02324 at 480.094 kb on + strand, within H281DRAFT_02324 at 480.095 kb on - strand, within H281DRAFT_02324 at 480.095 kb on - strand, within H281DRAFT_02324 at 480.097 kb on + strand at 480.097 kb on + strand, within H281DRAFT_02324 at 480.097 kb on + strand, within H281DRAFT_02324 at 480.097 kb on + strand, within H281DRAFT_02324 at 480.097 kb on + strand, within H281DRAFT_02324 at 480.098 kb on - strand, within H281DRAFT_02324 at 480.098 kb on - strand, within H281DRAFT_02324 at 480.098 kb on - strand, within H281DRAFT_02324 at 480.098 kb on - strand, within H281DRAFT_02324 at 480.098 kb on - strand, within H281DRAFT_02324 at 480.098 kb on - strand, within H281DRAFT_02324 at 480.103 kb on + strand, within H281DRAFT_02324 at 480.103 kb on + strand, within H281DRAFT_02324 at 480.103 kb on + strand, within H281DRAFT_02324 at 480.103 kb on + strand, within H281DRAFT_02324 at 480.103 kb on + strand, within H281DRAFT_02324 at 480.104 kb on - strand, within H281DRAFT_02324 at 480.104 kb on - strand, within H281DRAFT_02324 at 480.104 kb on - strand, within H281DRAFT_02324 at 480.104 kb on - strand at 480.104 kb on - strand, within H281DRAFT_02324 at 480.104 kb on - strand, within H281DRAFT_02324 at 480.104 kb on - strand, within H281DRAFT_02324 at 480.136 kb on + strand at 480.136 kb on + strand, within H281DRAFT_02324 at 480.136 kb on + strand, within H281DRAFT_02324 at 480.137 kb on - strand, within H281DRAFT_02324 at 480.223 kb on + strand, within H281DRAFT_02324 at 480.226 kb on + strand, within H281DRAFT_02324 at 480.226 kb on + strand, within H281DRAFT_02324 at 480.226 kb on + strand, within H281DRAFT_02324 at 480.226 kb on + strand, within H281DRAFT_02324 at 480.227 kb on - strand, within H281DRAFT_02324 at 480.256 kb on + strand, within H281DRAFT_02324 at 480.257 kb on - strand, within H281DRAFT_02324 at 480.277 kb on + strand, within H281DRAFT_02324 at 480.277 kb on + strand, within H281DRAFT_02324 at 480.278 kb on - strand, within H281DRAFT_02324 at 480.278 kb on - strand, within H281DRAFT_02324 at 480.278 kb on - strand, within H281DRAFT_02324 at 480.281 kb on + strand, within H281DRAFT_02324 at 480.281 kb on + strand, within H281DRAFT_02324 at 480.281 kb on + strand, within H281DRAFT_02324 at 480.411 kb on - strand, within H281DRAFT_02324 at 480.411 kb on - strand, within H281DRAFT_02324 at 480.512 kb on - strand, within H281DRAFT_02324 at 480.545 kb on - strand, within H281DRAFT_02324 at 480.577 kb on + strand, within H281DRAFT_02324 at 480.578 kb on - strand, within H281DRAFT_02324 at 480.578 kb on - strand, within H281DRAFT_02324 at 480.578 kb on - strand, within H281DRAFT_02324 at 480.775 kb on + strand, within H281DRAFT_02324 at 480.775 kb on + strand, within H281DRAFT_02324 at 480.898 kb on + strand, within H281DRAFT_02324 at 480.898 kb on + strand, within H281DRAFT_02324 at 480.898 kb on + strand, within H281DRAFT_02324 at 480.944 kb on + strand, within H281DRAFT_02324 at 481.265 kb on - strand, within H281DRAFT_02324 at 481.286 kb on - strand, within H281DRAFT_02324 at 481.399 kb on + strand, within H281DRAFT_02324 at 481.400 kb on - strand, within H281DRAFT_02324 at 481.438 kb on + strand, within H281DRAFT_02324 at 481.450 kb on + strand, within H281DRAFT_02324 at 481.450 kb on + strand, within H281DRAFT_02324 at 481.481 kb on - strand, within H281DRAFT_02324 at 481.573 kb on + strand, within H281DRAFT_02324 at 481.573 kb on + strand, within H281DRAFT_02324 at 481.574 kb on - strand, within H281DRAFT_02324 at 481.574 kb on - strand, within H281DRAFT_02324 at 481.574 kb on - strand, within H281DRAFT_02324 at 481.574 kb on - strand, within H281DRAFT_02324 at 481.604 kb on - strand, within H281DRAFT_02324 at 481.914 kb on + strand at 481.946 kb on + strand at 481.946 kb on + strand at 481.946 kb on + strand at 481.996 kb on + strand at 482.060 kb on - strand at 482.323 kb on + strand, within H281DRAFT_02325 at 482.323 kb on + strand, within H281DRAFT_02325 at 482.324 kb on - strand, within H281DRAFT_02325 at 482.403 kb on + strand, within H281DRAFT_02325 at 482.403 kb on + strand, within H281DRAFT_02325 at 482.404 kb on - strand at 482.427 kb on + strand, within H281DRAFT_02325 at 482.547 kb on + strand at 482.548 kb on - strand, within H281DRAFT_02325 at 482.549 kb on + strand, within H281DRAFT_02325 at 482.549 kb on + strand, within H281DRAFT_02325 at 482.550 kb on - strand, within H281DRAFT_02325 at 482.550 kb on - strand, within H281DRAFT_02325 at 482.550 kb on - strand, within H281DRAFT_02325 at 482.550 kb on - strand, within H281DRAFT_02325 at 482.550 kb on - strand, within H281DRAFT_02325 at 482.581 kb on + strand at 482.677 kb on + strand at 482.677 kb on + strand at 482.678 kb on - strand at 482.678 kb on - strand at 482.678 kb on - strand at 482.678 kb on - strand at 482.680 kb on + strand at 482.680 kb on + strand at 482.681 kb on - strand at 482.697 kb on - strand at 482.769 kb on + strand at 482.813 kb on - strand, within H281DRAFT_02326 at 482.813 kb on - strand, within H281DRAFT_02326
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 478,277 + -0.9 478,277 + +0.1 478,278 - -0.9 478,278 - +1.9 478,278 - +0.1 478,307 + -0.2 478,385 + -0.4 478,386 - +1.2 478,461 - +0.8 478,522 - H281DRAFT_02322 0.14 +0.0 478,522 - H281DRAFT_02322 0.14 +1.0 478,746 + -0.9 478,747 - +0.4 478,753 + +1.2 478,753 + +0.2 478,753 + +0.4 478,753 + +1.2 478,753 + -0.4 478,754 - -0.4 478,754 - +0.5 478,772 + -0.2 478,772 + +0.6 478,773 - +0.2 478,773 - -2.4 478,777 + +0.0 478,777 + +0.4 478,783 + -1.7 478,783 + +1.2 478,813 + H281DRAFT_02323 0.18 +0.8 478,814 - H281DRAFT_02323 0.18 -0.9 478,834 + H281DRAFT_02323 0.24 +1.6 478,840 + H281DRAFT_02323 0.26 +0.3 478,879 + H281DRAFT_02323 0.37 +0.4 478,879 + H281DRAFT_02323 0.37 +0.7 478,879 + H281DRAFT_02323 0.37 -2.3 478,895 - H281DRAFT_02323 0.41 +1.0 478,909 + H281DRAFT_02323 0.46 +0.1 478,924 + H281DRAFT_02323 0.50 -0.7 478,925 - H281DRAFT_02323 0.50 -1.4 479,002 - H281DRAFT_02323 0.72 +0.3 479,002 - H281DRAFT_02323 0.72 -0.2 479,085 + +1.2 479,086 - -2.1 479,151 + +0.3 479,151 + +0.2 479,151 + -0.6 479,152 - +1.0 479,167 + -0.8 479,178 + -1.1 479,178 + +0.1 479,179 - +0.4 479,307 + +0.1 479,431 + +0.6 479,432 - -1.2 479,464 + +1.3 479,518 + H281DRAFT_02324 0.11 +1.8 479,518 + H281DRAFT_02324 0.11 +0.4 479,518 + H281DRAFT_02324 0.11 -1.5 479,519 - H281DRAFT_02324 0.11 +0.1 479,675 + H281DRAFT_02324 0.17 +0.4 479,675 + H281DRAFT_02324 0.17 +0.4 479,676 - H281DRAFT_02324 0.17 +0.1 479,741 - H281DRAFT_02324 0.19 -0.7 479,741 - H281DRAFT_02324 0.19 +0.1 479,775 + H281DRAFT_02324 0.21 -2.0 479,775 + H281DRAFT_02324 0.21 -0.3 479,776 - H281DRAFT_02324 0.21 -0.4 479,776 - H281DRAFT_02324 0.21 +0.0 479,807 - H281DRAFT_02324 0.22 -1.3 479,830 + H281DRAFT_02324 0.23 -2.5 479,830 + H281DRAFT_02324 0.23 -2.3 479,831 - H281DRAFT_02324 0.23 -2.4 479,831 - H281DRAFT_02324 0.23 -1.0 479,834 - +0.2 479,834 - H281DRAFT_02324 0.23 +0.0 479,834 - H281DRAFT_02324 0.23 +0.2 480,094 + H281DRAFT_02324 0.32 +0.2 480,095 - H281DRAFT_02324 0.32 -1.0 480,095 - H281DRAFT_02324 0.32 -0.2 480,097 + -1.3 480,097 + H281DRAFT_02324 0.32 +0.6 480,097 + H281DRAFT_02324 0.32 -0.3 480,097 + H281DRAFT_02324 0.32 +0.6 480,097 + H281DRAFT_02324 0.32 -0.6 480,098 - H281DRAFT_02324 0.32 -0.4 480,098 - H281DRAFT_02324 0.32 -2.4 480,098 - H281DRAFT_02324 0.32 +0.8 480,098 - H281DRAFT_02324 0.32 +0.1 480,098 - H281DRAFT_02324 0.32 +0.5 480,098 - H281DRAFT_02324 0.32 +2.4 480,103 + H281DRAFT_02324 0.33 -1.1 480,103 + H281DRAFT_02324 0.33 -0.6 480,103 + H281DRAFT_02324 0.33 -0.1 480,103 + H281DRAFT_02324 0.33 -1.0 480,103 + H281DRAFT_02324 0.33 -0.2 480,104 - H281DRAFT_02324 0.33 -0.6 480,104 - H281DRAFT_02324 0.33 +0.9 480,104 - H281DRAFT_02324 0.33 -0.9 480,104 - +0.4 480,104 - H281DRAFT_02324 0.33 +0.4 480,104 - H281DRAFT_02324 0.33 -0.8 480,104 - H281DRAFT_02324 0.33 +0.3 480,136 + +0.8 480,136 + H281DRAFT_02324 0.34 +1.9 480,136 + H281DRAFT_02324 0.34 +0.1 480,137 - H281DRAFT_02324 0.34 -0.1 480,223 + H281DRAFT_02324 0.37 +0.3 480,226 + H281DRAFT_02324 0.37 -0.6 480,226 + H281DRAFT_02324 0.37 -0.0 480,226 + H281DRAFT_02324 0.37 +2.1 480,226 + H281DRAFT_02324 0.37 -0.3 480,227 - H281DRAFT_02324 0.37 +0.1 480,256 + H281DRAFT_02324 0.38 +0.1 480,257 - H281DRAFT_02324 0.38 -0.6 480,277 + H281DRAFT_02324 0.39 -1.1 480,277 + H281DRAFT_02324 0.39 -0.8 480,278 - H281DRAFT_02324 0.39 -3.0 480,278 - H281DRAFT_02324 0.39 -0.6 480,278 - H281DRAFT_02324 0.39 +0.3 480,281 + H281DRAFT_02324 0.39 -0.3 480,281 + H281DRAFT_02324 0.39 -0.2 480,281 + H281DRAFT_02324 0.39 -0.6 480,411 - H281DRAFT_02324 0.44 -0.7 480,411 - H281DRAFT_02324 0.44 +1.5 480,512 - H281DRAFT_02324 0.48 -2.5 480,545 - H281DRAFT_02324 0.49 -0.2 480,577 + H281DRAFT_02324 0.50 +0.0 480,578 - H281DRAFT_02324 0.50 -0.1 480,578 - H281DRAFT_02324 0.50 -1.0 480,578 - H281DRAFT_02324 0.50 +0.4 480,775 + H281DRAFT_02324 0.57 -1.8 480,775 + H281DRAFT_02324 0.57 +0.6 480,898 + H281DRAFT_02324 0.62 +0.9 480,898 + H281DRAFT_02324 0.62 -0.5 480,898 + H281DRAFT_02324 0.62 +0.1 480,944 + H281DRAFT_02324 0.63 -0.0 481,265 - H281DRAFT_02324 0.75 -1.2 481,286 - H281DRAFT_02324 0.76 -0.7 481,399 + H281DRAFT_02324 0.80 -1.0 481,400 - H281DRAFT_02324 0.80 -1.7 481,438 + H281DRAFT_02324 0.81 -1.1 481,450 + H281DRAFT_02324 0.82 +0.6 481,450 + H281DRAFT_02324 0.82 -0.1 481,481 - H281DRAFT_02324 0.83 -2.0 481,573 + H281DRAFT_02324 0.86 +0.0 481,573 + H281DRAFT_02324 0.86 -0.5 481,574 - H281DRAFT_02324 0.86 -0.2 481,574 - H281DRAFT_02324 0.86 +1.0 481,574 - H281DRAFT_02324 0.86 +0.2 481,574 - H281DRAFT_02324 0.86 +0.6 481,604 - H281DRAFT_02324 0.87 +0.7 481,914 + -0.3 481,946 + +1.4 481,946 + -0.0 481,946 + -2.1 481,996 + -0.2 482,060 - +0.7 482,323 + H281DRAFT_02325 0.43 -1.0 482,323 + H281DRAFT_02325 0.43 -1.3 482,324 - H281DRAFT_02325 0.43 -0.4 482,403 + H281DRAFT_02325 0.58 -1.6 482,403 + H281DRAFT_02325 0.58 +0.5 482,404 - +2.4 482,427 + H281DRAFT_02325 0.62 -0.2 482,547 + -0.2 482,548 - H281DRAFT_02325 0.85 -2.2 482,549 + H281DRAFT_02325 0.86 -3.5 482,549 + H281DRAFT_02325 0.86 -0.8 482,550 - H281DRAFT_02325 0.86 -0.7 482,550 - H281DRAFT_02325 0.86 -0.1 482,550 - H281DRAFT_02325 0.86 -0.6 482,550 - H281DRAFT_02325 0.86 +0.6 482,550 - H281DRAFT_02325 0.86 -1.9 482,581 + +0.8 482,677 + -0.7 482,677 + +2.2 482,678 - +0.4 482,678 - +1.1 482,678 - -0.9 482,678 - +0.3 482,680 + -1.9 482,680 + -1.9 482,681 - -1.9 482,697 - +1.1 482,769 + +0.2 482,813 - H281DRAFT_02326 0.12 +0.4 482,813 - H281DRAFT_02326 0.12 -1.8
Or see this region's nucleotide sequence