Experiment: Sebacic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00380 and H281DRAFT_00381 are separated by 52 nucleotides H281DRAFT_00381 and H281DRAFT_00382 are separated by 350 nucleotides
H281DRAFT_00380: H281DRAFT_00380 - nucleobase:cation symporter-1, NCS1 family, at 419,419 to 420,930
_00380
H281DRAFT_00381: H281DRAFT_00381 - dihydropyrimidinase, at 420,983 to 422,434
_00381
H281DRAFT_00382: H281DRAFT_00382 - amino acid ABC transporter substrate-binding protein, PAAT family, at 422,785 to 423,567
_00382
Position (kb) 420
421
422
423 Strain fitness (log2 ratio) -2
-1
0
1
2 at 420.452 kb on - strand, within H281DRAFT_00380 at 420.565 kb on + strand, within H281DRAFT_00380 at 420.566 kb on - strand, within H281DRAFT_00380 at 420.567 kb on + strand, within H281DRAFT_00380 at 420.568 kb on - strand, within H281DRAFT_00380 at 420.624 kb on - strand, within H281DRAFT_00380 at 420.635 kb on - strand, within H281DRAFT_00380 at 420.694 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.697 kb on - strand at 420.702 kb on + strand, within H281DRAFT_00380 at 420.822 kb on + strand at 420.829 kb on + strand at 420.835 kb on + strand at 420.836 kb on - strand at 420.836 kb on - strand at 420.836 kb on - strand at 420.836 kb on - strand at 420.968 kb on + strand at 421.178 kb on - strand, within H281DRAFT_00381 at 421.221 kb on - strand, within H281DRAFT_00381 at 421.395 kb on - strand, within H281DRAFT_00381 at 421.395 kb on - strand, within H281DRAFT_00381 at 421.817 kb on + strand, within H281DRAFT_00381 at 422.282 kb on - strand, within H281DRAFT_00381 at 422.593 kb on - strand at 422.613 kb on - strand at 422.914 kb on + strand, within H281DRAFT_00382 at 422.915 kb on - strand, within H281DRAFT_00382 at 422.915 kb on - strand, within H281DRAFT_00382
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C) remove 420,452 - H281DRAFT_00380 0.68 -1.7 420,565 + H281DRAFT_00380 0.76 +0.4 420,566 - H281DRAFT_00380 0.76 +0.3 420,567 + H281DRAFT_00380 0.76 +1.8 420,568 - H281DRAFT_00380 0.76 +0.6 420,624 - H281DRAFT_00380 0.80 +0.2 420,635 - H281DRAFT_00380 0.80 +0.8 420,694 + H281DRAFT_00380 0.84 -0.9 420,696 + H281DRAFT_00380 0.84 +0.7 420,696 + H281DRAFT_00380 0.84 -1.3 420,696 + H281DRAFT_00380 0.84 +0.3 420,696 + H281DRAFT_00380 0.84 +0.3 420,697 - -0.3 420,702 + H281DRAFT_00380 0.85 -0.5 420,822 + -2.6 420,829 + -1.0 420,835 + +0.3 420,836 - +0.8 420,836 - +0.9 420,836 - -0.8 420,836 - -0.2 420,968 + -0.7 421,178 - H281DRAFT_00381 0.13 +0.4 421,221 - H281DRAFT_00381 0.16 -0.4 421,395 - H281DRAFT_00381 0.28 +0.8 421,395 - H281DRAFT_00381 0.28 +1.0 421,817 + H281DRAFT_00381 0.57 +0.8 422,282 - H281DRAFT_00381 0.89 +0.2 422,593 - +0.1 422,613 - -0.5 422,914 + H281DRAFT_00382 0.16 -0.7 422,915 - H281DRAFT_00382 0.17 +0.5 422,915 - H281DRAFT_00382 0.17 -0.3
Or see this region's nucleotide sequence