Experiment: m.b. Phosphomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3440 and HP15_3441 are separated by 322 nucleotides HP15_3441 and HP15_3442 are separated by 82 nucleotides HP15_3442 and HP15_3443 are separated by 23 nucleotides HP15_3443 and HP15_3444 are separated by 95 nucleotides
HP15_3440: HP15_3440 - integral membrane protein, at 3,619,262 to 3,620,710
_3440
HP15_3441: HP15_3441 - OmpA/MotB domain protein, at 3,621,033 to 3,621,473
_3441
HP15_3442: HP15_3442 - conserved hypothetical protein, membrane, at 3,621,556 to 3,621,936
_3442
HP15_3443: HP15_3443 - transglycosylase-associated-like protein, at 3,621,960 to 3,622,202
_3443
HP15_3444: HP15_3444 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 3,622,298 to 3,622,996
_3444
Position (kb)
3621
3622 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3620.056 kb on - strand, within HP15_3440 at 3620.056 kb on - strand, within HP15_3440 at 3620.104 kb on - strand, within HP15_3440 at 3620.104 kb on - strand, within HP15_3440 at 3620.141 kb on + strand, within HP15_3440 at 3620.141 kb on + strand, within HP15_3440 at 3620.191 kb on - strand, within HP15_3440 at 3620.193 kb on + strand, within HP15_3440 at 3620.239 kb on + strand, within HP15_3440 at 3620.334 kb on - strand, within HP15_3440 at 3620.472 kb on - strand, within HP15_3440 at 3620.491 kb on - strand, within HP15_3440 at 3620.503 kb on + strand, within HP15_3440 at 3620.570 kb on - strand at 3620.572 kb on + strand at 3620.572 kb on + strand at 3620.653 kb on + strand at 3620.653 kb on + strand at 3620.655 kb on - strand at 3620.655 kb on - strand at 3620.655 kb on - strand at 3620.665 kb on - strand at 3620.795 kb on - strand at 3620.927 kb on + strand at 3620.976 kb on + strand at 3621.063 kb on - strand at 3621.389 kb on + strand, within HP15_3441 at 3621.395 kb on + strand, within HP15_3441 at 3621.510 kb on + strand at 3621.627 kb on - strand, within HP15_3442 at 3621.682 kb on + strand, within HP15_3442 at 3621.746 kb on + strand, within HP15_3442 at 3621.754 kb on - strand, within HP15_3442 at 3621.766 kb on - strand, within HP15_3442 at 3621.799 kb on - strand, within HP15_3442 at 3621.819 kb on - strand, within HP15_3442 at 3621.819 kb on - strand, within HP15_3442 at 3622.222 kb on - strand at 3622.280 kb on + strand at 3622.280 kb on - strand at 3622.280 kb on - strand at 3622.280 kb on - strand at 3622.366 kb on - strand at 3622.388 kb on - strand, within HP15_3444 at 3622.423 kb on + strand, within HP15_3444
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml remove 3,620,056 - HP15_3440 0.55 +0.5 3,620,056 - HP15_3440 0.55 +0.4 3,620,104 - HP15_3440 0.58 +1.8 3,620,104 - HP15_3440 0.58 +0.0 3,620,141 + HP15_3440 0.61 +1.2 3,620,141 + HP15_3440 0.61 -0.1 3,620,191 - HP15_3440 0.64 +0.1 3,620,193 + HP15_3440 0.64 +0.6 3,620,239 + HP15_3440 0.67 +1.0 3,620,334 - HP15_3440 0.74 -0.2 3,620,472 - HP15_3440 0.84 +0.1 3,620,491 - HP15_3440 0.85 +0.2 3,620,503 + HP15_3440 0.86 +0.9 3,620,570 - +0.2 3,620,572 + +0.1 3,620,572 + -0.1 3,620,653 + +0.4 3,620,653 + +0.5 3,620,655 - -0.2 3,620,655 - +0.4 3,620,655 - +0.9 3,620,665 - -0.1 3,620,795 - -1.0 3,620,927 + -0.9 3,620,976 + -0.9 3,621,063 - -1.8 3,621,389 + HP15_3441 0.81 -1.3 3,621,395 + HP15_3441 0.82 -2.5 3,621,510 + +0.4 3,621,627 - HP15_3442 0.19 -0.2 3,621,682 + HP15_3442 0.33 -0.5 3,621,746 + HP15_3442 0.50 -0.2 3,621,754 - HP15_3442 0.52 -0.2 3,621,766 - HP15_3442 0.55 -0.4 3,621,799 - HP15_3442 0.64 -1.4 3,621,819 - HP15_3442 0.69 +0.3 3,621,819 - HP15_3442 0.69 +0.3 3,622,222 - -0.0 3,622,280 + -0.2 3,622,280 - -0.3 3,622,280 - -0.6 3,622,280 - -0.2 3,622,366 - +0.0 3,622,388 - HP15_3444 0.13 -0.4 3,622,423 + HP15_3444 0.18 -0.0
Or see this region's nucleotide sequence