Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3061 and DvMF_3062 are separated by 214 nucleotides DvMF_3062 and DvMF_3063 are separated by 535 nucleotides DvMF_3063 and groEL are separated by 43 nucleotides
DvMF_3061: DvMF_3061 - ABC transporter related (RefSeq), at 3,864,595 to 3,866,586
_3061
DvMF_3062: DvMF_3062 - Na+/H+ antiporter NhaC (RefSeq), at 3,866,801 to 3,868,207
_3062
DvMF_3063: DvMF_3063 - chaperonin Cpn10 (RefSeq), at 3,868,743 to 3,869,030
_3063
DvMF_3064: groEL - chaperonin GroEL (RefSeq), at 3,869,074 to 3,870,720
groEL
Position (kb)
3866
3867
3868
3869 Strain fitness (log2 ratio)
-2
-1
0
1 at 3865.828 kb on - strand, within DvMF_3061 at 3865.991 kb on - strand, within DvMF_3061 at 3866.111 kb on - strand, within DvMF_3061 at 3866.118 kb on - strand at 3866.294 kb on - strand, within DvMF_3061 at 3866.296 kb on - strand, within DvMF_3061 at 3866.469 kb on - strand at 3866.700 kb on + strand at 3866.721 kb on - strand at 3866.811 kb on - strand at 3867.007 kb on + strand, within DvMF_3062 at 3867.211 kb on - strand, within DvMF_3062 at 3867.339 kb on - strand, within DvMF_3062 at 3867.493 kb on + strand, within DvMF_3062 at 3867.562 kb on - strand, within DvMF_3062 at 3867.674 kb on + strand, within DvMF_3062 at 3867.778 kb on + strand, within DvMF_3062 at 3867.972 kb on + strand, within DvMF_3062 at 3867.972 kb on + strand, within DvMF_3062 at 3868.194 kb on - strand at 3868.298 kb on + strand at 3868.298 kb on + strand at 3868.333 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,865,828 - DvMF_3061 0.62 -0.3 3,865,991 - DvMF_3061 0.70 +0.7 3,866,111 - DvMF_3061 0.76 +0.2 3,866,118 - +1.2 3,866,294 - DvMF_3061 0.85 +0.0 3,866,296 - DvMF_3061 0.85 +0.0 3,866,469 - -0.2 3,866,700 + +0.4 3,866,721 - -0.4 3,866,811 - +0.7 3,867,007 + DvMF_3062 0.15 -0.3 3,867,211 - DvMF_3062 0.29 -0.5 3,867,339 - DvMF_3062 0.38 -0.7 3,867,493 + DvMF_3062 0.49 -0.8 3,867,562 - DvMF_3062 0.54 -2.2 3,867,674 + DvMF_3062 0.62 -0.3 3,867,778 + DvMF_3062 0.69 -0.9 3,867,972 + DvMF_3062 0.83 -0.1 3,867,972 + DvMF_3062 0.83 -0.4 3,868,194 - -0.0 3,868,298 + -0.8 3,868,298 + -0.2 3,868,333 - -0.1
Or see this region's nucleotide sequence