Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2306 and DvMF_2307 are separated by 182 nucleotides DvMF_2307 and DvMF_2308 are separated by 407 nucleotides
DvMF_2306: DvMF_2306 - carbamoyl-phosphate synthase, large subunit (RefSeq), at 2,896,618 to 2,899,854
_2306
DvMF_2307: DvMF_2307 - amidophosphoribosyltransferase (RefSeq), at 2,900,037 to 2,901,440
_2307
DvMF_2308: DvMF_2308 - KpsF/GutQ family protein (RefSeq), at 2,901,848 to 2,902,849
_2308
Position (kb)
2900
2901
2902 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 2899.087 kb on - strand, within DvMF_2306 at 2899.104 kb on + strand, within DvMF_2306 at 2899.352 kb on + strand, within DvMF_2306 at 2899.559 kb on + strand at 2899.687 kb on - strand at 2899.793 kb on - strand at 2899.819 kb on - strand at 2899.824 kb on - strand at 2899.895 kb on - strand at 2900.172 kb on - strand at 2900.382 kb on - strand, within DvMF_2307 at 2900.521 kb on - strand, within DvMF_2307 at 2900.725 kb on + strand, within DvMF_2307 at 2900.726 kb on - strand, within DvMF_2307 at 2900.803 kb on + strand, within DvMF_2307 at 2900.957 kb on + strand, within DvMF_2307 at 2900.957 kb on - strand, within DvMF_2307 at 2901.041 kb on + strand, within DvMF_2307 at 2901.049 kb on - strand, within DvMF_2307 at 2901.605 kb on - strand at 2901.672 kb on - strand at 2901.714 kb on - strand at 2901.714 kb on - strand at 2901.714 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,899,087 - DvMF_2306 0.76 -5.1 2,899,104 + DvMF_2306 0.77 -2.8 2,899,352 + DvMF_2306 0.84 -3.5 2,899,559 + -3.8 2,899,687 - -5.1 2,899,793 - -0.4 2,899,819 - -2.3 2,899,824 - -2.3 2,899,895 - -0.8 2,900,172 - -5.5 2,900,382 - DvMF_2307 0.25 -7.0 2,900,521 - DvMF_2307 0.34 -4.9 2,900,725 + DvMF_2307 0.49 -4.2 2,900,726 - DvMF_2307 0.49 -5.7 2,900,803 + DvMF_2307 0.55 -6.5 2,900,957 + DvMF_2307 0.66 -5.4 2,900,957 - DvMF_2307 0.66 -5.6 2,901,041 + DvMF_2307 0.72 -5.1 2,901,049 - DvMF_2307 0.72 -4.4 2,901,605 - -0.1 2,901,672 - +0.7 2,901,714 - -0.0 2,901,714 - +0.0 2,901,714 - -0.2
Or see this region's nucleotide sequence