Experiment: MoYLS4 with Mercury 10uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3136 and fabG are separated by 627 nucleotides fabG and DVU3139 are separated by 925 nucleotides
DVU3136: DVU3136 - nitroreductase family protein (TIGR), at 3,283,437 to 3,284,093
DVU3136
DVU3137: fabG - oxidoreductase, short chain dehydrogenase/reductase family (TIGR), at 3,284,721 to 3,285,497
fabG
DVU3139: DVU3139 - bacterial extracellular solute-binding protein, family 3 (TIGR), at 3,286,423 to 3,287,199
DVU3139
Position (kb)
3284
3285
3286 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3283.895 kb on + strand, within DVU3136 at 3283.955 kb on + strand, within DVU3136 at 3284.108 kb on + strand at 3284.178 kb on + strand at 3284.462 kb on - strand at 3284.468 kb on + strand at 3284.514 kb on + strand at 3284.641 kb on + strand at 3284.663 kb on + strand at 3284.790 kb on + strand at 3284.791 kb on - strand at 3284.791 kb on - strand at 3284.791 kb on - strand at 3284.798 kb on - strand at 3284.864 kb on - strand, within fabG at 3284.875 kb on + strand, within fabG at 3284.875 kb on + strand, within fabG at 3284.875 kb on + strand, within fabG at 3284.878 kb on - strand, within fabG at 3284.890 kb on - strand, within fabG at 3284.891 kb on - strand, within fabG at 3284.913 kb on + strand, within fabG at 3284.918 kb on + strand, within fabG at 3284.926 kb on - strand, within fabG at 3285.007 kb on - strand, within fabG at 3285.049 kb on - strand, within fabG at 3285.066 kb on - strand, within fabG at 3285.073 kb on - strand, within fabG at 3285.087 kb on + strand, within fabG at 3285.087 kb on + strand, within fabG at 3285.092 kb on + strand, within fabG at 3285.095 kb on - strand, within fabG at 3285.095 kb on - strand, within fabG at 3285.100 kb on - strand, within fabG at 3285.273 kb on + strand, within fabG at 3285.273 kb on + strand, within fabG at 3285.273 kb on + strand, within fabG at 3285.273 kb on + strand, within fabG at 3285.273 kb on + strand, within fabG at 3285.281 kb on - strand, within fabG at 3285.301 kb on + strand, within fabG at 3285.314 kb on + strand, within fabG at 3285.321 kb on + strand, within fabG at 3285.369 kb on - strand, within fabG at 3285.369 kb on - strand, within fabG at 3285.420 kb on + strand at 3285.422 kb on + strand at 3285.437 kb on + strand at 3285.437 kb on + strand at 3285.536 kb on + strand at 3285.536 kb on + strand at 3285.581 kb on + strand at 3285.581 kb on + strand at 3285.589 kb on - strand at 3285.623 kb on - strand at 3285.630 kb on + strand at 3285.643 kb on - strand at 3285.701 kb on - strand at 3285.701 kb on - strand at 3285.714 kb on + strand at 3285.835 kb on + strand at 3285.885 kb on - strand at 3285.954 kb on + strand at 3285.989 kb on - strand at 3286.130 kb on - strand at 3286.154 kb on + strand at 3286.154 kb on + strand at 3286.219 kb on + strand at 3286.222 kb on - strand at 3286.247 kb on - strand at 3286.297 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Mercury 10uM remove 3,283,895 + DVU3136 0.70 -0.1 3,283,955 + DVU3136 0.79 -0.1 3,284,108 + +0.3 3,284,178 + -0.1 3,284,462 - +0.1 3,284,468 + +1.5 3,284,514 + +2.3 3,284,641 + -0.6 3,284,663 + -0.0 3,284,790 + +1.0 3,284,791 - +0.0 3,284,791 - +0.1 3,284,791 - +0.1 3,284,798 - -0.4 3,284,864 - fabG DVU3137 0.18 +0.4 3,284,875 + fabG DVU3137 0.20 +0.5 3,284,875 + fabG DVU3137 0.20 -0.1 3,284,875 + fabG DVU3137 0.20 +1.1 3,284,878 - fabG DVU3137 0.20 +1.0 3,284,890 - fabG DVU3137 0.22 -1.0 3,284,891 - fabG DVU3137 0.22 +0.2 3,284,913 + fabG DVU3137 0.25 -0.4 3,284,918 + fabG DVU3137 0.25 +0.5 3,284,926 - fabG DVU3137 0.26 +0.3 3,285,007 - fabG DVU3137 0.37 -1.9 3,285,049 - fabG DVU3137 0.42 +0.3 3,285,066 - fabG DVU3137 0.44 -0.2 3,285,073 - fabG DVU3137 0.45 -0.4 3,285,087 + fabG DVU3137 0.47 -1.0 3,285,087 + fabG DVU3137 0.47 +1.2 3,285,092 + fabG DVU3137 0.48 +0.1 3,285,095 - fabG DVU3137 0.48 +1.0 3,285,095 - fabG DVU3137 0.48 +0.7 3,285,100 - fabG DVU3137 0.49 -0.1 3,285,273 + fabG DVU3137 0.71 +0.3 3,285,273 + fabG DVU3137 0.71 -1.9 3,285,273 + fabG DVU3137 0.71 -0.2 3,285,273 + fabG DVU3137 0.71 +0.1 3,285,273 + fabG DVU3137 0.71 -0.1 3,285,281 - fabG DVU3137 0.72 -0.0 3,285,301 + fabG DVU3137 0.75 +0.4 3,285,314 + fabG DVU3137 0.76 +0.1 3,285,321 + fabG DVU3137 0.77 -0.3 3,285,369 - fabG DVU3137 0.83 +0.3 3,285,369 - fabG DVU3137 0.83 +0.2 3,285,420 + -1.4 3,285,422 + -0.1 3,285,437 + -0.4 3,285,437 + -0.4 3,285,536 + -0.2 3,285,536 + -0.1 3,285,581 + -0.3 3,285,581 + -0.3 3,285,589 - -0.3 3,285,623 - -0.1 3,285,630 + -1.2 3,285,643 - -0.2 3,285,701 - +0.0 3,285,701 - +0.2 3,285,714 + +0.3 3,285,835 + +1.6 3,285,885 - -0.2 3,285,954 + -0.3 3,285,989 - -0.6 3,286,130 - -0.2 3,286,154 + -1.5 3,286,154 + -0.1 3,286,219 + +0.7 3,286,222 - +1.5 3,286,247 - +0.1 3,286,297 + -0.1
Or see this region's nucleotide sequence