Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.5224.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
4,961,441	+		Xcc-8004.5223.1	0.18	+0.6
4,961,442	-		Xcc-8004.5223.1	0.18	+0.9
4,961,442	-		Xcc-8004.5223.1	0.18	+0.8
4,961,485	+		Xcc-8004.5223.1	0.22	+1.2
4,961,486	-		Xcc-8004.5223.1	0.22	+0.1
4,961,505	+		Xcc-8004.5223.1	0.24	-0.7
4,961,505	+		Xcc-8004.5223.1	0.24	-0.3
4,961,505	+		Xcc-8004.5223.1	0.24	+0.7
4,961,505	+		Xcc-8004.5223.1	0.24	+0.9
4,961,506	-		Xcc-8004.5223.1	0.24	-1.0
4,961,529	+		Xcc-8004.5223.1	0.26	+0.9
4,961,529	+		Xcc-8004.5223.1	0.26	+1.2
4,961,537	+		Xcc-8004.5223.1	0.27	-0.6
4,961,588	+		Xcc-8004.5223.1	0.31	-0.5
4,961,589	-		Xcc-8004.5223.1	0.31	+0.8
4,961,607	+		Xcc-8004.5223.1	0.33	+1.5
4,961,608	-		Xcc-8004.5223.1	0.33	+1.1
4,961,718	+		Xcc-8004.5223.1	0.43	-0.3
4,961,718	+		Xcc-8004.5223.1	0.43	-0.8
4,961,744	+		Xcc-8004.5223.1	0.45	+0.2
4,961,854	+		Xcc-8004.5223.1	0.55	+0.3
4,961,854	+		Xcc-8004.5223.1	0.55	+1.9
4,961,939	-		Xcc-8004.5223.1	0.63	-1.4
4,962,007	+		Xcc-8004.5223.1	0.69	+0.6
4,962,143	+		Xcc-8004.5223.1	0.81	-0.7
4,962,144	-		Xcc-8004.5223.1	0.81	+0.1
4,962,280	+				-1.3
4,962,281	-				+0.9
4,962,323	+				-0.1
4,962,324	-				+0.3
4,962,324	-				-1.4
4,962,324	-				-0.8
4,962,324	-				-1.3
4,962,381	+				+0.6
4,962,382	-				+0.6
4,962,571	+		Xcc-8004.5224.1	0.45	-1.2
4,962,583	+		Xcc-8004.5224.1	0.48	-1.1
4,962,655	+		Xcc-8004.5224.1	0.67	+0.7
4,962,704	-		Xcc-8004.5224.1	0.80	-0.9
4,962,823	-				+1.0
4,963,061	+		Xcc-8004.5225.1	0.22	-0.6
4,963,061	+		Xcc-8004.5225.1	0.22	-0.2
4,963,062	-		Xcc-8004.5225.1	0.22	-0.1
4,963,138	-		Xcc-8004.5225.1	0.40	-0.3
4,963,138	-		Xcc-8004.5225.1	0.40	+1.9
4,963,138	-		Xcc-8004.5225.1	0.40	+0.8
4,963,151	-		Xcc-8004.5225.1	0.43	-0.4
4,963,163	-		Xcc-8004.5225.1	0.46	+0.0
4,963,203	-		Xcc-8004.5225.1	0.56	-0.7
4,963,248	+		Xcc-8004.5225.1	0.66	-2.5
4,963,352	+				+1.0
4,963,352	+				-0.4
4,963,353	-				-0.7
4,963,366	+				-0.4
4,963,382	-				-1.0
4,963,472	+				+0.8
4,963,473	-				-0.5
4,963,473	-				+0.1
4,963,474	+				-0.3
4,963,474	+				-0.7
4,963,474	+				+1.0
4,963,474	+				+1.4
4,963,475	-				+0.2
4,963,475	-				+0.9
4,963,475	-				-1.0
4,963,475	-				-0.4
4,963,558	+				+0.3
4,963,566	+				-0.9
4,963,566	+				+1.9
4,963,566	+				-0.1
4,963,566	+				+0.5
4,963,566	+				-1.9
4,963,566	+				+0.1
4,963,720	+		Xcc-8004.5226.1	0.67	+0.3
4,963,721	-		Xcc-8004.5226.1	0.68	-0.1
4,963,721	-		Xcc-8004.5226.1	0.68	-0.8