Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.4498.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
4,303,422	-				+1.2
4,303,422	-				+0.4
4,303,422	-				+0.2
4,303,455	+				-0.0
4,303,466	+				-2.4
4,303,536	+				-0.1
4,303,537	-				+0.0
4,303,628	-		Xcc-8004.4495.1	0.33	-0.6
4,303,708	-				+0.2
4,303,793	+				-0.5
4,303,794	-				+1.2
4,303,956	+				+0.9
4,303,956	+				-1.6
4,303,956	+				+1.3
4,303,956	+				-0.4
4,303,957	-				-0.7
4,303,957	-				-0.8
4,303,960	+				+0.1
4,304,111	+		Xcc-8004.4497.1	0.42	+1.1
4,304,114	+		Xcc-8004.4497.1	0.43	-0.3
4,304,114	+		Xcc-8004.4497.1	0.43	+0.8
4,304,114	+		Xcc-8004.4497.1	0.43	+0.7
4,304,115	-		Xcc-8004.4497.1	0.43	-0.9
4,304,208	-		Xcc-8004.4497.1	0.78	+0.6
4,304,783	-		Xcc-8004.4498.1	0.58	-0.3
4,304,859	+		Xcc-8004.4498.1	0.67	-0.6
4,305,010	+		Xcc-8004.4498.1	0.87	-0.6
4,305,011	-		Xcc-8004.4498.1	0.87	-0.0
4,305,011	-		Xcc-8004.4498.1	0.87	-1.7
4,305,011	-		Xcc-8004.4498.1	0.87	-0.1
4,305,090	+				-0.7
4,305,271	+		Xcc-8004.4499.1	0.45	+0.1
4,305,432	+		Xcc-8004.4499.1	0.86	-0.7
4,305,433	-		Xcc-8004.4499.1	0.87	-0.2
4,305,641	+				-0.2
4,305,641	+				-0.1
4,305,641	+				+0.5
4,305,676	+				+0.7
4,305,677	-				+0.4
4,305,744	+				+0.6
4,305,865	+				-0.1
4,305,865	+				+0.1
4,305,866	-				+0.1