Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.3873.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
3,741,722	+		Xcc-8004.3872.1	0.51	-0.7
3,741,722	+		Xcc-8004.3872.1	0.51	+1.0
3,741,722	+		Xcc-8004.3872.1	0.51	-1.2
3,741,723	-		Xcc-8004.3872.1	0.51	+0.5
3,741,747	-		Xcc-8004.3872.1	0.52	+0.6
3,741,821	+		Xcc-8004.3872.1	0.56	+1.2
3,741,822	-		Xcc-8004.3872.1	0.56	+0.7
3,741,926	-		Xcc-8004.3872.1	0.62	-0.1
3,742,077	+		Xcc-8004.3872.1	0.69	+0.2
3,742,428	+		Xcc-8004.3872.1	0.88	-0.4
3,742,429	-		Xcc-8004.3872.1	0.88	-1.6
3,742,744	+		Xcc-8004.3873.1	0.43	+0.9
3,742,744	+		Xcc-8004.3873.1	0.43	-0.1
3,742,744	+		Xcc-8004.3873.1	0.43	-2.7
3,742,745	-		Xcc-8004.3873.1	0.44	-0.3
3,742,775	+		Xcc-8004.3873.1	0.64	-1.4
3,742,776	-		Xcc-8004.3873.1	0.65	-1.4
3,742,838	-				-1.8
3,742,838	-				-1.1
3,743,071	+				+1.2
3,743,072	-				-1.0
3,743,198	+				+0.2
3,743,199	-				+0.6
3,743,199	-				+0.0
3,743,248	-				+0.2
3,743,306	+				-2.0
3,743,306	+				-1.0
3,743,307	-				+0.7
3,743,467	+		Xcc-8004.3875.1	0.28	+0.5
3,743,468	-		Xcc-8004.3875.1	0.28	-1.5