Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.2169.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
2,099,562	+		Xcc-8004.2168.1	0.39	+0.4
2,099,748	+		Xcc-8004.2168.1	0.55	-2.4
2,099,748	+		Xcc-8004.2168.1	0.55	-0.8
2,099,749	-		Xcc-8004.2168.1	0.56	-1.4
2,099,991	+		Xcc-8004.2168.1	0.77	+0.3
2,099,991	+		Xcc-8004.2168.1	0.77	-0.6
2,099,992	-		Xcc-8004.2168.1	0.77	+0.7
2,100,064	-		Xcc-8004.2168.1	0.83	+2.6
2,100,135	+		Xcc-8004.2168.1	0.89	-0.4
2,100,208	-				-3.3
2,100,208	-				+0.6
2,100,306	+				-1.7
2,100,306	+				+1.3
2,100,306	+				+0.7
2,100,306	+				-0.1
2,100,306	+				+0.7
2,100,306	+				-0.2
2,100,306	+				-0.4
2,100,306	+				+1.3
2,100,333	+				+1.4
2,100,377	+				+1.4
2,100,377	+				+0.9
2,100,377	+				+1.6
2,100,386	+				-0.0
2,100,386	+				+0.3
2,100,386	+				-1.4
2,100,386	+				-0.0
2,100,386	+				-1.5
2,100,386	+				-1.4
2,100,386	+				-0.3
2,100,386	+				-1.3
2,100,386	+				-0.6
2,100,386	+				-0.0
2,100,386	+				-1.0
2,100,386	+				+0.6
2,100,386	+				-0.8
2,100,386	+				-0.4
2,100,386	+				+0.4
2,100,513	+		Xcc-8004.2169.1	0.35	-1.1
2,100,513	+		Xcc-8004.2169.1	0.35	-0.8
2,100,513	+		Xcc-8004.2169.1	0.35	+1.6
2,100,513	+		Xcc-8004.2169.1	0.35	-1.7
2,100,513	+		Xcc-8004.2169.1	0.35	+1.6
2,100,513	+		Xcc-8004.2169.1	0.35	-0.8
2,100,513	+		Xcc-8004.2169.1	0.35	-1.4
2,100,513	+		Xcc-8004.2169.1	0.35	+1.0
2,100,513	+		Xcc-8004.2169.1	0.35	-1.1
2,100,741	+				-1.3
2,100,741	+				+0.4
2,100,741	+				-0.5
2,100,813	+				-0.8
2,100,813	+				-0.3
2,100,814	-				-1.3
2,100,814	-				-1.6
2,100,814	-				-0.4
2,101,006	+				+1.4
2,101,006	+				-1.0
2,101,006	+				-0.1
2,101,035	+				-1.5
2,101,035	+				-0.3