Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.1720.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
1,649,659	+		Xcc-8004.1719.1	0.54	-0.5
1,649,659	+		Xcc-8004.1719.1	0.54	+1.8
1,649,659	+		Xcc-8004.1719.1	0.54	-1.2
1,649,659	+		Xcc-8004.1719.1	0.54	-1.7
1,649,659	+		Xcc-8004.1719.1	0.54	-0.1
1,649,659	+		Xcc-8004.1719.1	0.54	+0.1
1,649,908	+		Xcc-8004.1719.1	0.68	+0.7
1,649,909	-		Xcc-8004.1719.1	0.68	+0.7
1,649,909	-		Xcc-8004.1719.1	0.68	+1.9
1,650,070	+		Xcc-8004.1719.1	0.76	-1.1
1,650,070	+		Xcc-8004.1719.1	0.76	+0.0
1,650,070	+		Xcc-8004.1719.1	0.76	+0.3
1,650,071	-		Xcc-8004.1719.1	0.77	+0.4
1,650,331	+				-0.8
1,650,331	+				+0.4
1,650,332	-				-0.3
1,650,332	-				-0.7
1,650,332	-				-0.1
1,650,400	+				+0.3
1,650,400	+				-0.1
1,650,400	+				+0.3
1,650,400	+				+0.6
1,650,400	+				-0.7
1,650,401	-				-1.4
1,650,401	-				-0.4
1,650,537	+				-0.4
1,650,573	+				+0.1
1,650,573	+				-0.3
1,650,573	+				+1.0
1,650,650	+		Xcc-8004.1720.1	0.10	-0.9
1,650,650	+		Xcc-8004.1720.1	0.10	-0.2
1,650,732	+		Xcc-8004.1720.1	0.25	-1.8
1,650,732	+		Xcc-8004.1720.1	0.25	-0.3
1,650,732	+		Xcc-8004.1720.1	0.25	+1.0
1,650,897	+		Xcc-8004.1720.1	0.54	-0.1
1,651,065	-		Xcc-8004.1720.1	0.84	-0.1