Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.1430.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
1,368,506	+		Xcc-8004.1428.1	0.17	-0.1
1,368,506	+		Xcc-8004.1428.1	0.17	+2.9
1,368,507	-		Xcc-8004.1428.1	0.18	-0.4
1,368,507	-		Xcc-8004.1428.1	0.18	-1.0
1,368,507	-		Xcc-8004.1428.1	0.18	+0.8
1,368,507	-		Xcc-8004.1428.1	0.18	+1.7
1,368,507	-		Xcc-8004.1428.1	0.18	+0.8
1,368,550	-		Xcc-8004.1428.1	0.24	-0.8
1,368,798	+		Xcc-8004.1428.1	0.62	+1.5
1,368,798	+		Xcc-8004.1428.1	0.62	+0.8
1,368,799	-		Xcc-8004.1428.1	0.63	-0.9
1,368,799	-		Xcc-8004.1428.1	0.63	-0.3
1,368,948	+		Xcc-8004.1428.1	0.86	-0.8
1,368,948	+		Xcc-8004.1428.1	0.86	-1.5
1,368,948	+		Xcc-8004.1428.1	0.86	+0.0
1,368,949	-		Xcc-8004.1428.1	0.86	+1.1
1,368,998	+				-0.4
1,368,999	-				-0.2
1,369,058	+				+1.3
1,369,058	+				+0.1
1,369,059	-				-1.4
1,369,107	+				-0.4
1,369,107	+				-1.7
1,369,107	+				+0.3
1,369,107	+				-0.5
1,369,107	+				-1.5
1,369,107	+				+0.5
1,369,107	+				+0.3
1,369,108	-				-0.7
1,369,108	-				-0.8
1,369,108	-				-0.4
1,369,108	-				+0.6
1,369,108	-				+0.1
1,369,111	+				+1.5
1,369,111	+				-0.8
1,369,112	-				-0.4
1,369,160	+				-0.7
1,369,161	-				+1.0
1,369,161	-				-0.7
1,369,161	-				-0.4
1,369,161	-				+0.9
1,369,322	+				+0.1
1,369,322	+				+0.1
1,369,323	-				-0.6
1,369,323	-				-1.1
1,369,323	-				-0.5
1,369,323	-				-0.9
1,369,323	-				+0.4
1,369,477	+		Xcc-8004.1430.1	0.17	+0.9
1,369,537	+		Xcc-8004.1430.1	0.25	-0.1
1,369,537	+		Xcc-8004.1430.1	0.25	-1.1
1,369,537	+		Xcc-8004.1430.1	0.25	-0.1
1,369,538	-		Xcc-8004.1430.1	0.25	+1.0
1,369,538	-		Xcc-8004.1430.1	0.25	-0.2
1,369,538	-		Xcc-8004.1430.1	0.25	-0.6
1,369,538	-		Xcc-8004.1430.1	0.25	-1.3
1,369,538	-		Xcc-8004.1430.1	0.25	+1.2
1,369,538	-		Xcc-8004.1430.1	0.25	-1.4
1,369,538	-		Xcc-8004.1430.1	0.25	-1.4
1,369,570	+		Xcc-8004.1430.1	0.29	+0.1
1,369,570	+		Xcc-8004.1430.1	0.29	-2.5
1,369,571	-		Xcc-8004.1430.1	0.29	-2.1
1,369,901	+		Xcc-8004.1430.1	0.72	-1.6
1,369,901	+		Xcc-8004.1430.1	0.72	+1.1
1,369,901	+		Xcc-8004.1430.1	0.72	+0.1
1,369,901	+		Xcc-8004.1430.1	0.72	+0.4
1,369,967	+		Xcc-8004.1430.1	0.80	-1.2
1,370,133	+				+0.2
1,370,135	+				+0.1
1,370,135	+				-2.8
1,370,135	+				+0.9
1,370,135	+				+1.4
1,370,136	-				+0.7
1,370,155	+				+1.0
1,370,156	-				-0.5
1,370,176	-				-0.5
1,370,176	-				-0.3