Strain Fitness in Xanthomonas campestris pv. campestris strain 8004 around Xcc-8004.1137.1

Experiment: Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X
1,082,971	+		Xcc-8004.1135.1	0.78	-0.2
1,083,202	+				+0.9
1,083,203	-				-0.2
1,083,203	-				+0.4
1,083,203	-				+0.1
1,083,203	-				-1.2
1,083,203	-				-0.3
1,083,852	+				+0.2
1,083,853	-				+0.1
1,083,853	-				+1.0
1,083,951	+				+1.2
1,084,161	+		Xcc-8004.1137.1	0.45	-2.1
1,084,257	+		Xcc-8004.1137.1	0.65	-1.4
1,084,314	+		Xcc-8004.1137.1	0.77	-0.0
1,084,589	+		Xcc-8004.1138.1	0.27	-1.3
1,084,589	+		Xcc-8004.1138.1	0.27	+1.1
1,084,590	-		Xcc-8004.1138.1	0.27	-1.8
1,084,590	-		Xcc-8004.1138.1	0.27	+1.1
1,084,794	-		Xcc-8004.1138.1	0.59	+0.5
1,084,972	+		Xcc-8004.1138.1	0.86	-2.1
1,084,972	+		Xcc-8004.1138.1	0.86	+2.5
1,084,972	+		Xcc-8004.1138.1	0.86	-0.5
1,084,972	+		Xcc-8004.1138.1	0.86	-0.3
1,084,973	-		Xcc-8004.1138.1	0.87	-1.2
1,084,973	-		Xcc-8004.1138.1	0.87	-0.4
1,085,063	-				-0.3
1,085,063	-				-2.2
1,085,063	-				-0.5
1,085,063	-				-1.3
1,085,063	-				-0.8
1,085,230	+				-0.6
1,085,230	+				+0.1
1,085,231	-				-0.6
1,085,231	-				-0.4
1,085,231	-				-0.8
1,085,231	-				+0.1
1,085,231	-				-0.3
1,085,355	+				-0.2
1,085,376	-				+0.8