Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_616 and HP15_617 are separated by 46 nucleotides HP15_617 and HP15_618 are separated by 80 nucleotides
HP15_616: HP15_616 - UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase, at 638,387 to 639,781
_616
HP15_617: HP15_617 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, at 639,828 to 640,475
_617
HP15_618: HP15_618 - acyl-CoA dehydrogenase domain protein, at 640,556 to 641,737
_618
Position (kb) 639
640
641 Strain fitness (log2 ratio) -1
0
1 at 638.919 kb on + strand, within HP15_616 at 638.982 kb on - strand, within HP15_616 at 639.098 kb on + strand, within HP15_616 at 639.098 kb on + strand, within HP15_616 at 639.224 kb on + strand, within HP15_616 at 639.232 kb on - strand, within HP15_616 at 639.278 kb on + strand, within HP15_616 at 639.284 kb on - strand, within HP15_616 at 639.302 kb on - strand, within HP15_616 at 639.425 kb on + strand, within HP15_616 at 639.450 kb on + strand, within HP15_616 at 639.463 kb on - strand, within HP15_616 at 639.500 kb on - strand, within HP15_616 at 639.500 kb on - strand, within HP15_616 at 639.500 kb on - strand, within HP15_616 at 639.504 kb on + strand, within HP15_616 at 639.693 kb on + strand at 639.756 kb on - strand at 640.469 kb on + strand at 640.470 kb on + strand at 640.488 kb on - strand at 640.493 kb on + strand at 640.826 kb on + strand, within HP15_618 at 640.850 kb on + strand, within HP15_618 at 640.858 kb on - strand, within HP15_618 at 640.865 kb on - strand, within HP15_618 at 640.941 kb on - strand, within HP15_618 at 640.997 kb on + strand, within HP15_618 at 641.107 kb on + strand, within HP15_618 at 641.130 kb on + strand, within HP15_618 at 641.266 kb on - strand, within HP15_618 at 641.288 kb on + strand, within HP15_618 at 641.376 kb on + strand, within HP15_618 at 641.393 kb on - strand, within HP15_618
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 638,919 + HP15_616 0.38 +0.4 638,982 - HP15_616 0.43 +0.1 639,098 + HP15_616 0.51 +0.1 639,098 + HP15_616 0.51 -0.1 639,224 + HP15_616 0.60 +0.5 639,232 - HP15_616 0.61 -0.3 639,278 + HP15_616 0.64 -0.8 639,284 - HP15_616 0.64 -0.2 639,302 - HP15_616 0.66 +0.3 639,425 + HP15_616 0.74 +0.0 639,450 + HP15_616 0.76 +0.0 639,463 - HP15_616 0.77 -0.6 639,500 - HP15_616 0.80 +0.4 639,500 - HP15_616 0.80 +1.1 639,500 - HP15_616 0.80 -0.5 639,504 + HP15_616 0.80 +0.3 639,693 + -0.0 639,756 - -0.7 640,469 + -1.4 640,470 + -0.1 640,488 - -1.1 640,493 + +0.9 640,826 + HP15_618 0.23 -0.0 640,850 + HP15_618 0.25 +1.3 640,858 - HP15_618 0.26 -0.6 640,865 - HP15_618 0.26 -0.6 640,941 - HP15_618 0.33 +0.6 640,997 + HP15_618 0.37 +0.2 641,107 + HP15_618 0.47 +1.0 641,130 + HP15_618 0.49 +0.2 641,266 - HP15_618 0.60 -0.8 641,288 + HP15_618 0.62 -0.7 641,376 + HP15_618 0.69 +0.1 641,393 - HP15_618 0.71 +0.1
Or see this region's nucleotide sequence