Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3842 and HP15_3843 are separated by 193 nucleotides HP15_3843 and HP15_3844 are separated by 143 nucleotides HP15_3844 and HP15_3845 are separated by 16 nucleotides
HP15_3842: HP15_3842 - iron(III) ABC transporter, ATP-binding protein, at 4,068,355 to 4,069,470
_3842
HP15_3843: HP15_3843 - iron(III) ABC transporter, periplasmic iron-compound-binding protein, at 4,069,664 to 4,070,686
_3843
HP15_3844: HP15_3844 - membrane protein containing SNARE associated golgi protein domain, at 4,070,830 to 4,071,522
_3844
HP15_3845: HP15_3845 - ADP-ribosylation/crystallin J1-like protein, at 4,071,539 to 4,072,711
_3845
Position (kb)
4069
4070
4071 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 4068.667 kb on + strand, within HP15_3842 at 4068.670 kb on + strand, within HP15_3842 at 4068.675 kb on - strand, within HP15_3842 at 4068.675 kb on - strand, within HP15_3842 at 4068.675 kb on - strand, within HP15_3842 at 4068.689 kb on + strand, within HP15_3842 at 4068.697 kb on - strand, within HP15_3842 at 4068.745 kb on + strand, within HP15_3842 at 4068.779 kb on + strand, within HP15_3842 at 4068.837 kb on + strand, within HP15_3842 at 4068.856 kb on - strand, within HP15_3842 at 4068.884 kb on - strand, within HP15_3842 at 4068.970 kb on + strand, within HP15_3842 at 4068.970 kb on + strand, within HP15_3842 at 4068.983 kb on - strand, within HP15_3842 at 4069.056 kb on - strand, within HP15_3842 at 4069.056 kb on - strand, within HP15_3842 at 4069.106 kb on + strand, within HP15_3842 at 4069.117 kb on + strand, within HP15_3842 at 4069.209 kb on - strand, within HP15_3842 at 4069.220 kb on - strand, within HP15_3842 at 4069.947 kb on + strand, within HP15_3843 at 4069.970 kb on + strand, within HP15_3843 at 4069.978 kb on - strand, within HP15_3843 at 4069.978 kb on - strand, within HP15_3843 at 4070.013 kb on + strand, within HP15_3843 at 4070.033 kb on - strand, within HP15_3843 at 4070.033 kb on - strand, within HP15_3843 at 4070.104 kb on + strand, within HP15_3843 at 4070.110 kb on + strand, within HP15_3843 at 4070.140 kb on + strand, within HP15_3843 at 4070.176 kb on - strand, within HP15_3843 at 4070.224 kb on + strand, within HP15_3843 at 4070.251 kb on + strand, within HP15_3843 at 4070.254 kb on + strand, within HP15_3843 at 4070.270 kb on + strand, within HP15_3843 at 4070.270 kb on + strand, within HP15_3843 at 4070.297 kb on + strand, within HP15_3843 at 4070.329 kb on - strand, within HP15_3843 at 4070.341 kb on + strand, within HP15_3843 at 4070.355 kb on + strand, within HP15_3843 at 4070.384 kb on - strand, within HP15_3843 at 4070.412 kb on + strand, within HP15_3843 at 4070.478 kb on - strand, within HP15_3843 at 4070.521 kb on + strand, within HP15_3843 at 4070.726 kb on - strand at 4070.741 kb on - strand at 4070.789 kb on + strand at 4070.803 kb on + strand at 4070.908 kb on - strand, within HP15_3844 at 4070.934 kb on - strand, within HP15_3844 at 4071.037 kb on - strand, within HP15_3844 at 4071.037 kb on - strand, within HP15_3844 at 4071.120 kb on - strand, within HP15_3844 at 4071.228 kb on + strand, within HP15_3844 at 4071.258 kb on - strand, within HP15_3844 at 4071.259 kb on + strand, within HP15_3844 at 4071.264 kb on + strand, within HP15_3844 at 4071.277 kb on - strand, within HP15_3844 at 4071.330 kb on + strand, within HP15_3844 at 4071.352 kb on + strand, within HP15_3844 at 4071.360 kb on - strand, within HP15_3844 at 4071.381 kb on - strand, within HP15_3844 at 4071.386 kb on + strand, within HP15_3844 at 4071.398 kb on + strand, within HP15_3844 at 4071.455 kb on + strand at 4071.463 kb on - strand at 4071.524 kb on - strand at 4071.594 kb on - strand at 4071.605 kb on + strand at 4071.610 kb on + strand at 4071.613 kb on - strand at 4071.613 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 4,068,667 + HP15_3842 0.28 -0.4 4,068,670 + HP15_3842 0.28 -0.4 4,068,675 - HP15_3842 0.29 -1.0 4,068,675 - HP15_3842 0.29 +0.4 4,068,675 - HP15_3842 0.29 +0.3 4,068,689 + HP15_3842 0.30 -0.1 4,068,697 - HP15_3842 0.31 -0.5 4,068,745 + HP15_3842 0.35 +0.4 4,068,779 + HP15_3842 0.38 -1.8 4,068,837 + HP15_3842 0.43 -1.0 4,068,856 - HP15_3842 0.45 +0.0 4,068,884 - HP15_3842 0.47 +0.1 4,068,970 + HP15_3842 0.55 +0.1 4,068,970 + HP15_3842 0.55 -2.8 4,068,983 - HP15_3842 0.56 -0.6 4,069,056 - HP15_3842 0.63 -0.4 4,069,056 - HP15_3842 0.63 +1.3 4,069,106 + HP15_3842 0.67 -1.2 4,069,117 + HP15_3842 0.68 +0.5 4,069,209 - HP15_3842 0.77 +0.2 4,069,220 - HP15_3842 0.78 +0.4 4,069,947 + HP15_3843 0.28 +1.0 4,069,970 + HP15_3843 0.30 -0.1 4,069,978 - HP15_3843 0.31 -1.9 4,069,978 - HP15_3843 0.31 +0.3 4,070,013 + HP15_3843 0.34 +0.1 4,070,033 - HP15_3843 0.36 +0.8 4,070,033 - HP15_3843 0.36 +0.4 4,070,104 + HP15_3843 0.43 +0.4 4,070,110 + HP15_3843 0.44 +0.3 4,070,140 + HP15_3843 0.47 +1.6 4,070,176 - HP15_3843 0.50 +0.7 4,070,224 + HP15_3843 0.55 -0.2 4,070,251 + HP15_3843 0.57 +4.8 4,070,254 + HP15_3843 0.58 -0.3 4,070,270 + HP15_3843 0.59 +0.7 4,070,270 + HP15_3843 0.59 -0.3 4,070,297 + HP15_3843 0.62 +0.2 4,070,329 - HP15_3843 0.65 +1.6 4,070,341 + HP15_3843 0.66 +0.3 4,070,355 + HP15_3843 0.68 +1.5 4,070,384 - HP15_3843 0.70 +0.1 4,070,412 + HP15_3843 0.73 +1.2 4,070,478 - HP15_3843 0.80 +0.6 4,070,521 + HP15_3843 0.84 -0.0 4,070,726 - -0.1 4,070,741 - +1.2 4,070,789 + -0.0 4,070,803 + -1.8 4,070,908 - HP15_3844 0.11 +1.6 4,070,934 - HP15_3844 0.15 +1.6 4,071,037 - HP15_3844 0.30 +0.0 4,071,037 - HP15_3844 0.30 -1.4 4,071,120 - HP15_3844 0.42 +0.8 4,071,228 + HP15_3844 0.57 +0.2 4,071,258 - HP15_3844 0.62 -1.0 4,071,259 + HP15_3844 0.62 -2.1 4,071,264 + HP15_3844 0.63 +0.2 4,071,277 - HP15_3844 0.65 +0.1 4,071,330 + HP15_3844 0.72 +0.2 4,071,352 + HP15_3844 0.75 +0.0 4,071,360 - HP15_3844 0.76 -0.0 4,071,381 - HP15_3844 0.80 -0.4 4,071,386 + HP15_3844 0.80 +0.4 4,071,398 + HP15_3844 0.82 +0.5 4,071,455 + +0.0 4,071,463 - +0.5 4,071,524 - -1.1 4,071,594 - +0.8 4,071,605 + -0.2 4,071,610 + -1.1 4,071,613 - -0.2 4,071,613 - -0.1
Or see this region's nucleotide sequence