Strain Fitness in Marinobacter adhaerens HP15 around HP15_3841

Experiment: m.b. Aluminum chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3840 and HP15_3841 are separated by 147 nucleotidesHP15_3841 and HP15_3842 are separated by 7 nucleotides HP15_3840: HP15_3840 - metallophosphoesterase, at 4,065,636 to 4,066,487 _3840 HP15_3841: HP15_3841 - iron(III) ABC transporter permease protein, at 4,066,635 to 4,068,347 _3841 HP15_3842: HP15_3842 - iron(III) ABC transporter, ATP-binding protein, at 4,068,355 to 4,069,470 _3842 Position (kb) 4066 4067 4068 4069Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4065.863 kb on - strand, within HP15_3840at 4065.922 kb on + strand, within HP15_3840at 4065.942 kb on + strand, within HP15_3840at 4065.950 kb on - strand, within HP15_3840at 4065.955 kb on + strand, within HP15_3840at 4065.980 kb on + strand, within HP15_3840at 4066.105 kb on - strand, within HP15_3840at 4066.147 kb on - strand, within HP15_3840at 4066.188 kb on + strand, within HP15_3840at 4066.198 kb on - strand, within HP15_3840at 4066.221 kb on + strand, within HP15_3840at 4066.242 kb on - strand, within HP15_3840at 4066.297 kb on + strand, within HP15_3840at 4066.305 kb on - strand, within HP15_3840at 4066.382 kb on - strand, within HP15_3840at 4066.420 kb on - strandat 4066.435 kb on + strandat 4066.448 kb on - strandat 4066.453 kb on - strandat 4066.486 kb on + strandat 4066.486 kb on + strandat 4066.494 kb on - strandat 4066.494 kb on - strandat 4066.494 kb on - strandat 4066.561 kb on - strandat 4066.595 kb on + strandat 4066.603 kb on - strandat 4066.603 kb on - strandat 4066.603 kb on - strandat 4066.704 kb on - strandat 4066.861 kb on + strand, within HP15_3841at 4066.899 kb on + strand, within HP15_3841at 4066.914 kb on + strand, within HP15_3841at 4066.992 kb on + strand, within HP15_3841at 4067.077 kb on + strand, within HP15_3841at 4067.133 kb on - strand, within HP15_3841at 4067.151 kb on + strand, within HP15_3841at 4067.161 kb on + strand, within HP15_3841at 4067.161 kb on + strand, within HP15_3841at 4067.333 kb on + strand, within HP15_3841at 4067.343 kb on + strand, within HP15_3841at 4067.356 kb on - strand, within HP15_3841at 4067.364 kb on + strand, within HP15_3841at 4067.400 kb on - strand, within HP15_3841at 4067.516 kb on + strand, within HP15_3841at 4067.516 kb on + strand, within HP15_3841at 4067.524 kb on - strand, within HP15_3841at 4067.555 kb on + strand, within HP15_3841at 4067.615 kb on - strand, within HP15_3841at 4067.869 kb on - strand, within HP15_3841at 4067.869 kb on - strand, within HP15_3841at 4067.941 kb on + strand, within HP15_3841at 4067.959 kb on - strand, within HP15_3841at 4067.959 kb on - strand, within HP15_3841at 4068.005 kb on - strand, within HP15_3841at 4068.017 kb on + strand, within HP15_3841at 4068.018 kb on + strand, within HP15_3841at 4068.112 kb on - strand, within HP15_3841at 4068.140 kb on - strand, within HP15_3841at 4068.257 kb on - strandat 4068.520 kb on + strand, within HP15_3842at 4068.528 kb on - strand, within HP15_3842at 4068.608 kb on + strand, within HP15_3842at 4068.632 kb on + strand, within HP15_3842at 4068.667 kb on + strand, within HP15_3842at 4068.670 kb on + strand, within HP15_3842at 4068.675 kb on - strand, within HP15_3842at 4068.675 kb on - strand, within HP15_3842at 4068.675 kb on - strand, within HP15_3842at 4068.689 kb on + strand, within HP15_3842at 4068.697 kb on - strand, within HP15_3842at 4068.745 kb on + strand, within HP15_3842at 4068.779 kb on + strand, within HP15_3842at 4068.837 kb on + strand, within HP15_3842at 4068.856 kb on - strand, within HP15_3842at 4068.884 kb on - strand, within HP15_3842at 4068.970 kb on + strand, within HP15_3842at 4068.970 kb on + strand, within HP15_3842at 4068.983 kb on - strand, within HP15_3842at 4069.056 kb on - strand, within HP15_3842at 4069.056 kb on - strand, within HP15_3842at 4069.106 kb on + strand, within HP15_3842at 4069.117 kb on + strand, within HP15_3842at 4069.209 kb on - strand, within HP15_3842at 4069.220 kb on - strand, within HP15_3842

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM
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4,065,863 - HP15_3840 0.27 +0.0
4,065,922 + HP15_3840 0.34 +0.6
4,065,942 + HP15_3840 0.36 +0.2
4,065,950 - HP15_3840 0.37 +1.3
4,065,955 + HP15_3840 0.37 -0.0
4,065,980 + HP15_3840 0.40 +0.3
4,066,105 - HP15_3840 0.55 +0.9
4,066,147 - HP15_3840 0.60 -0.2
4,066,188 + HP15_3840 0.65 +0.9
4,066,198 - HP15_3840 0.66 +0.6
4,066,221 + HP15_3840 0.69 +0.4
4,066,242 - HP15_3840 0.71 +0.4
4,066,297 + HP15_3840 0.78 +0.5
4,066,305 - HP15_3840 0.79 +0.9
4,066,382 - HP15_3840 0.88 +0.7
4,066,420 - +0.5
4,066,435 + +0.7
4,066,448 - +0.3
4,066,453 - -0.3
4,066,486 + -0.2
4,066,486 + +0.4
4,066,494 - +0.1
4,066,494 - +1.2
4,066,494 - -0.3
4,066,561 - -0.8
4,066,595 + +0.0
4,066,603 - +0.4
4,066,603 - +0.3
4,066,603 - +0.4
4,066,704 - +0.8
4,066,861 + HP15_3841 0.13 +0.7
4,066,899 + HP15_3841 0.15 +2.4
4,066,914 + HP15_3841 0.16 +0.5
4,066,992 + HP15_3841 0.21 +0.6
4,067,077 + HP15_3841 0.26 +0.6
4,067,133 - HP15_3841 0.29 +0.4
4,067,151 + HP15_3841 0.30 +0.7
4,067,161 + HP15_3841 0.31 -0.4
4,067,161 + HP15_3841 0.31 +0.6
4,067,333 + HP15_3841 0.41 -0.3
4,067,343 + HP15_3841 0.41 +0.6
4,067,356 - HP15_3841 0.42 +1.4
4,067,364 + HP15_3841 0.43 +0.5
4,067,400 - HP15_3841 0.45 +0.6
4,067,516 + HP15_3841 0.51 +0.0
4,067,516 + HP15_3841 0.51 +0.9
4,067,524 - HP15_3841 0.52 +0.2
4,067,555 + HP15_3841 0.54 +0.8
4,067,615 - HP15_3841 0.57 +0.3
4,067,869 - HP15_3841 0.72 +1.3
4,067,869 - HP15_3841 0.72 +0.4
4,067,941 + HP15_3841 0.76 +0.5
4,067,959 - HP15_3841 0.77 +1.2
4,067,959 - HP15_3841 0.77 -0.1
4,068,005 - HP15_3841 0.80 +0.7
4,068,017 + HP15_3841 0.81 +1.2
4,068,018 + HP15_3841 0.81 +0.2
4,068,112 - HP15_3841 0.86 +0.2
4,068,140 - HP15_3841 0.88 +1.1
4,068,257 - +0.5
4,068,520 + HP15_3842 0.15 +0.4
4,068,528 - HP15_3842 0.16 +0.2
4,068,608 + HP15_3842 0.23 -0.2
4,068,632 + HP15_3842 0.25 -0.3
4,068,667 + HP15_3842 0.28 -0.4
4,068,670 + HP15_3842 0.28 -0.4
4,068,675 - HP15_3842 0.29 -1.0
4,068,675 - HP15_3842 0.29 +0.4
4,068,675 - HP15_3842 0.29 +0.3
4,068,689 + HP15_3842 0.30 -0.1
4,068,697 - HP15_3842 0.31 -0.5
4,068,745 + HP15_3842 0.35 +0.4
4,068,779 + HP15_3842 0.38 -1.8
4,068,837 + HP15_3842 0.43 -1.0
4,068,856 - HP15_3842 0.45 +0.0
4,068,884 - HP15_3842 0.47 +0.1
4,068,970 + HP15_3842 0.55 +0.1
4,068,970 + HP15_3842 0.55 -2.8
4,068,983 - HP15_3842 0.56 -0.6
4,069,056 - HP15_3842 0.63 -0.4
4,069,056 - HP15_3842 0.63 +1.3
4,069,106 + HP15_3842 0.67 -1.2
4,069,117 + HP15_3842 0.68 +0.5
4,069,209 - HP15_3842 0.77 +0.2
4,069,220 - HP15_3842 0.78 +0.4

Or see this region's nucleotide sequence