Strain Fitness in Marinobacter adhaerens HP15 around HP15_3762

Experiment: m.b. Aluminum chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3761 and HP15_3762 are separated by 116 nucleotidesHP15_3762 and HP15_3763 are separated by 158 nucleotides HP15_3761: HP15_3761 - transport protein, at 3,982,149 to 3,983,471 _3761 HP15_3762: HP15_3762 - protein containing DUF1653, at 3,983,588 to 3,983,818 _3762 HP15_3763: HP15_3763 - response regulator receiver domain protein (CheY), at 3,983,977 to 3,985,773 _3763 Position (kb) 3983 3984Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3982.617 kb on - strand, within HP15_3761at 3982.688 kb on + strand, within HP15_3761at 3982.688 kb on + strand, within HP15_3761at 3982.707 kb on + strand, within HP15_3761at 3982.710 kb on - strand, within HP15_3761at 3982.744 kb on + strand, within HP15_3761at 3982.744 kb on + strand, within HP15_3761at 3982.752 kb on - strand, within HP15_3761at 3982.756 kb on - strand, within HP15_3761at 3982.763 kb on + strand, within HP15_3761at 3982.816 kb on - strand, within HP15_3761at 3982.871 kb on - strand, within HP15_3761at 3982.907 kb on + strand, within HP15_3761at 3982.909 kb on - strand, within HP15_3761at 3982.915 kb on - strand, within HP15_3761at 3982.924 kb on - strand, within HP15_3761at 3982.938 kb on - strand, within HP15_3761at 3982.992 kb on + strand, within HP15_3761at 3983.017 kb on - strand, within HP15_3761at 3983.102 kb on - strand, within HP15_3761at 3983.178 kb on + strand, within HP15_3761at 3983.191 kb on + strand, within HP15_3761at 3983.238 kb on - strand, within HP15_3761at 3983.287 kb on + strand, within HP15_3761at 3983.287 kb on + strand, within HP15_3761at 3983.287 kb on + strand, within HP15_3761at 3983.287 kb on + strand, within HP15_3761at 3983.295 kb on - strand, within HP15_3761at 3983.295 kb on - strand, within HP15_3761at 3983.300 kb on - strand, within HP15_3761at 3983.300 kb on - strand, within HP15_3761at 3983.328 kb on + strand, within HP15_3761at 3983.400 kb on + strandat 3983.408 kb on - strandat 3983.586 kb on + strandat 3983.620 kb on - strand, within HP15_3762at 3983.654 kb on + strand, within HP15_3762at 3983.671 kb on + strand, within HP15_3762at 3983.696 kb on - strand, within HP15_3762at 3983.740 kb on - strand, within HP15_3762at 3983.740 kb on - strand, within HP15_3762at 3983.740 kb on - strand, within HP15_3762at 3983.744 kb on + strand, within HP15_3762at 3983.745 kb on - strand, within HP15_3762at 3983.759 kb on + strand, within HP15_3762at 3983.768 kb on - strand, within HP15_3762at 3983.818 kb on + strandat 3983.843 kb on + strandat 3983.851 kb on - strandat 3983.851 kb on - strandat 3983.865 kb on + strandat 3983.873 kb on - strandat 3983.958 kb on - strandat 3984.071 kb on + strandat 3984.071 kb on + strandat 3984.120 kb on + strandat 3984.128 kb on - strandat 3984.140 kb on + strandat 3984.146 kb on + strandat 3984.167 kb on - strand, within HP15_3763at 3984.302 kb on - strand, within HP15_3763at 3984.319 kb on + strand, within HP15_3763at 3984.322 kb on - strand, within HP15_3763at 3984.333 kb on - strand, within HP15_3763at 3984.491 kb on - strand, within HP15_3763at 3984.491 kb on - strand, within HP15_3763at 3984.537 kb on - strand, within HP15_3763at 3984.576 kb on + strand, within HP15_3763

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM
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3,982,617 - HP15_3761 0.35 -1.2
3,982,688 + HP15_3761 0.41 +0.0
3,982,688 + HP15_3761 0.41 +0.3
3,982,707 + HP15_3761 0.42 +0.3
3,982,710 - HP15_3761 0.42 -0.9
3,982,744 + HP15_3761 0.45 -0.3
3,982,744 + HP15_3761 0.45 +0.1
3,982,752 - HP15_3761 0.46 +0.1
3,982,756 - HP15_3761 0.46 +1.0
3,982,763 + HP15_3761 0.46 -0.2
3,982,816 - HP15_3761 0.50 -0.6
3,982,871 - HP15_3761 0.55 -2.2
3,982,907 + HP15_3761 0.57 -0.2
3,982,909 - HP15_3761 0.57 -0.2
3,982,915 - HP15_3761 0.58 +0.1
3,982,924 - HP15_3761 0.59 -1.0
3,982,938 - HP15_3761 0.60 +0.1
3,982,992 + HP15_3761 0.64 +0.3
3,983,017 - HP15_3761 0.66 +0.1
3,983,102 - HP15_3761 0.72 -0.6
3,983,178 + HP15_3761 0.78 +0.3
3,983,191 + HP15_3761 0.79 +0.1
3,983,238 - HP15_3761 0.82 +0.0
3,983,287 + HP15_3761 0.86 +0.1
3,983,287 + HP15_3761 0.86 -0.2
3,983,287 + HP15_3761 0.86 -0.1
3,983,287 + HP15_3761 0.86 -0.3
3,983,295 - HP15_3761 0.87 +0.1
3,983,295 - HP15_3761 0.87 -2.0
3,983,300 - HP15_3761 0.87 +0.3
3,983,300 - HP15_3761 0.87 -0.0
3,983,328 + HP15_3761 0.89 -0.3
3,983,400 + -0.1
3,983,408 - +0.3
3,983,586 + -0.1
3,983,620 - HP15_3762 0.14 -0.1
3,983,654 + HP15_3762 0.29 +1.3
3,983,671 + HP15_3762 0.36 +0.6
3,983,696 - HP15_3762 0.47 +0.4
3,983,740 - HP15_3762 0.66 +0.6
3,983,740 - HP15_3762 0.66 +3.7
3,983,740 - HP15_3762 0.66 +0.4
3,983,744 + HP15_3762 0.68 +1.9
3,983,745 - HP15_3762 0.68 +2.1
3,983,759 + HP15_3762 0.74 +0.3
3,983,768 - HP15_3762 0.78 +0.1
3,983,818 + +0.3
3,983,843 + -0.5
3,983,851 - -0.1
3,983,851 - -0.4
3,983,865 + -1.0
3,983,873 - +0.3
3,983,958 - +0.6
3,984,071 + +2.7
3,984,071 + -0.3
3,984,120 + +0.5
3,984,128 - +3.4
3,984,140 + -0.9
3,984,146 + +0.2
3,984,167 - HP15_3763 0.11 +1.1
3,984,302 - HP15_3763 0.18 +1.0
3,984,319 + HP15_3763 0.19 +0.0
3,984,322 - HP15_3763 0.19 -0.3
3,984,333 - HP15_3763 0.20 +1.0
3,984,491 - HP15_3763 0.29 +0.2
3,984,491 - HP15_3763 0.29 +0.5
3,984,537 - HP15_3763 0.31 -0.1
3,984,576 + HP15_3763 0.33 -0.0

Or see this region's nucleotide sequence