Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3510 and HP15_3511 are separated by 26 nucleotides HP15_3511 and HP15_3512 are separated by 48 nucleotides HP15_3512 and HP15_3513 are separated by 297 nucleotides HP15_3513 and HP15_3514 are separated by 32 nucleotides
HP15_3510: HP15_3510 - transcriptional regulator, at 3,693,346 to 3,693,882
_3510
HP15_3511: HP15_3511 - TonB family protein, at 3,693,909 to 3,694,775
_3511
HP15_3512: HP15_3512 - glutathione synthetase, at 3,694,824 to 3,695,777
_3512
HP15_3513: HP15_3513 - response regulator receiver domain protein (CheY), at 3,696,075 to 3,696,467
_3513
HP15_3514: HP15_3514 - response regulator receiver domain protein (CheY), at 3,696,500 to 3,696,862
_3514
Position (kb)
3694
3695
3696 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3693.940 kb on + strand at 3694.090 kb on - strand, within HP15_3511 at 3694.134 kb on - strand, within HP15_3511 at 3694.200 kb on + strand, within HP15_3511 at 3694.200 kb on + strand, within HP15_3511 at 3694.210 kb on + strand, within HP15_3511 at 3694.627 kb on + strand, within HP15_3511 at 3694.655 kb on + strand, within HP15_3511 at 3694.687 kb on - strand, within HP15_3511 at 3694.715 kb on - strand at 3694.822 kb on + strand at 3694.894 kb on - strand at 3695.036 kb on + strand, within HP15_3512 at 3695.036 kb on + strand, within HP15_3512 at 3695.044 kb on - strand, within HP15_3512 at 3695.163 kb on + strand, within HP15_3512 at 3695.431 kb on + strand, within HP15_3512 at 3695.449 kb on - strand, within HP15_3512 at 3695.471 kb on + strand, within HP15_3512 at 3695.561 kb on - strand, within HP15_3512 at 3695.564 kb on + strand, within HP15_3512 at 3695.572 kb on - strand, within HP15_3512 at 3695.572 kb on - strand, within HP15_3512 at 3695.614 kb on - strand, within HP15_3512 at 3695.614 kb on - strand, within HP15_3512 at 3695.685 kb on + strand at 3695.693 kb on - strand at 3695.703 kb on - strand at 3695.801 kb on - strand at 3695.824 kb on - strand at 3695.837 kb on + strand at 3695.870 kb on + strand at 3695.887 kb on - strand at 3695.887 kb on - strand at 3695.933 kb on - strand at 3695.987 kb on - strand at 3696.006 kb on + strand at 3696.006 kb on + strand at 3696.006 kb on + strand at 3696.006 kb on + strand at 3696.014 kb on - strand at 3696.014 kb on - strand at 3696.014 kb on - strand at 3696.065 kb on - strand at 3696.067 kb on + strand at 3696.166 kb on + strand, within HP15_3513 at 3696.201 kb on - strand, within HP15_3513 at 3696.260 kb on - strand, within HP15_3513 at 3696.281 kb on - strand, within HP15_3513 at 3696.296 kb on - strand, within HP15_3513 at 3696.349 kb on + strand, within HP15_3513 at 3696.370 kb on + strand, within HP15_3513 at 3696.387 kb on + strand, within HP15_3513 at 3696.392 kb on + strand, within HP15_3513 at 3696.393 kb on + strand, within HP15_3513 at 3696.425 kb on + strand, within HP15_3513 at 3696.425 kb on + strand, within HP15_3513 at 3696.425 kb on + strand, within HP15_3513 at 3696.425 kb on + strand, within HP15_3513 at 3696.433 kb on - strand at 3696.433 kb on - strand at 3696.433 kb on - strand at 3696.433 kb on - strand at 3696.568 kb on + strand, within HP15_3514 at 3696.590 kb on + strand, within HP15_3514 at 3696.590 kb on + strand, within HP15_3514 at 3696.678 kb on + strand, within HP15_3514 at 3696.678 kb on + strand, within HP15_3514 at 3696.708 kb on - strand, within HP15_3514
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 3,693,940 + -1.5 3,694,090 - HP15_3511 0.21 -2.1 3,694,134 - HP15_3511 0.26 -1.6 3,694,200 + HP15_3511 0.34 -2.0 3,694,200 + HP15_3511 0.34 -1.1 3,694,210 + HP15_3511 0.35 -2.4 3,694,627 + HP15_3511 0.83 -2.1 3,694,655 + HP15_3511 0.86 -1.8 3,694,687 - HP15_3511 0.90 -1.2 3,694,715 - -0.8 3,694,822 + -0.2 3,694,894 - +2.0 3,695,036 + HP15_3512 0.22 +1.8 3,695,036 + HP15_3512 0.22 +2.6 3,695,044 - HP15_3512 0.23 +2.1 3,695,163 + HP15_3512 0.36 +2.2 3,695,431 + HP15_3512 0.64 +2.8 3,695,449 - HP15_3512 0.66 +2.0 3,695,471 + HP15_3512 0.68 +2.2 3,695,561 - HP15_3512 0.77 +1.6 3,695,564 + HP15_3512 0.78 +1.8 3,695,572 - HP15_3512 0.78 +2.0 3,695,572 - HP15_3512 0.78 +0.1 3,695,614 - HP15_3512 0.83 +1.8 3,695,614 - HP15_3512 0.83 +3.2 3,695,685 + +1.9 3,695,693 - +2.1 3,695,703 - +2.5 3,695,801 - -0.3 3,695,824 - +0.4 3,695,837 + +0.2 3,695,870 + +0.1 3,695,887 - -0.4 3,695,887 - +0.4 3,695,933 - -0.2 3,695,987 - +1.2 3,696,006 + +1.0 3,696,006 + +0.2 3,696,006 + -0.9 3,696,006 + +0.3 3,696,014 - +0.7 3,696,014 - -0.0 3,696,014 - +0.5 3,696,065 - +0.8 3,696,067 + +0.3 3,696,166 + HP15_3513 0.23 +1.9 3,696,201 - HP15_3513 0.32 +0.5 3,696,260 - HP15_3513 0.47 +0.3 3,696,281 - HP15_3513 0.52 +0.6 3,696,296 - HP15_3513 0.56 +0.5 3,696,349 + HP15_3513 0.70 -0.1 3,696,370 + HP15_3513 0.75 +0.6 3,696,387 + HP15_3513 0.79 +0.5 3,696,392 + HP15_3513 0.81 -1.4 3,696,393 + HP15_3513 0.81 +0.2 3,696,425 + HP15_3513 0.89 +0.3 3,696,425 + HP15_3513 0.89 +0.7 3,696,425 + HP15_3513 0.89 +0.1 3,696,425 + HP15_3513 0.89 -0.0 3,696,433 - +0.2 3,696,433 - +0.4 3,696,433 - +0.8 3,696,433 - +0.6 3,696,568 + HP15_3514 0.19 -0.1 3,696,590 + HP15_3514 0.25 +0.1 3,696,590 + HP15_3514 0.25 +0.3 3,696,678 + HP15_3514 0.49 +0.4 3,696,678 + HP15_3514 0.49 +0.2 3,696,708 - HP15_3514 0.57 +0.3
Or see this region's nucleotide sequence