Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35710

Experiment: L-Glutamine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)
3,743,011	-				-0.5
3,743,100	+				-0.4
3,743,100	+				+0.0
3,743,100	+				-0.9
3,743,142	-				-0.1
3,743,149	-				-0.1
3,743,152	+				+0.1
3,743,159	+				+0.5
3,743,160	-				-1.1
3,743,160	-				-0.6
3,743,160	-				-0.9
3,743,169	+				-1.6
3,743,169	+				-1.2
3,743,223	-				-0.8
3,743,255	+				-0.7
3,743,283	-				-1.5
3,743,283	-				-0.6
3,743,318	-				-0.5
3,743,318	-				-2.7
3,743,375	+		PGA1_c35700	0.17	-0.7
3,743,454	-		PGA1_c35700	0.28	-1.9
3,743,457	+		PGA1_c35700	0.28	-1.0
3,743,459	-		PGA1_c35700	0.28	-2.9
3,743,465	-		PGA1_c35700	0.29	-1.3
3,743,465	-		PGA1_c35700	0.29	-0.8
3,743,488	-		PGA1_c35700	0.32	-0.7
3,743,516	+		PGA1_c35700	0.36	-0.0
3,743,535	+		PGA1_c35700	0.39	-2.2
3,743,563	-		PGA1_c35700	0.42	-0.1
3,743,563	-		PGA1_c35700	0.42	-0.9
3,743,707	+		PGA1_c35700	0.62	-0.9
3,743,711	-		PGA1_c35700	0.63	-1.7
3,743,770	-		PGA1_c35700	0.71	-2.1
3,743,781	+		PGA1_c35700	0.72	-1.8
3,743,781	+		PGA1_c35700	0.72	-1.9
3,743,789	-		PGA1_c35700	0.73	-1.9
3,743,789	-		PGA1_c35700	0.73	-0.2
3,743,843	+		PGA1_c35700	0.81	-0.1
3,743,852	-		PGA1_c35700	0.82	-0.8
3,743,900	-		PGA1_c35700	0.88	-1.6
3,743,912	-				-1.0
3,743,954	+				+0.3
3,743,965	+				+0.0
3,744,042	+				-1.4
3,744,042	+				-1.5
3,744,043	-				-1.4
3,744,125	+				-1.1
3,744,125	+				-0.1
3,744,125	+				-0.2
3,744,125	+				-0.2
3,744,125	+				-0.2
3,744,125	+				-2.6
3,744,133	-				-2.0
3,744,133	-				-0.1
3,744,133	-				-2.2
3,744,169	-				-0.3
3,744,205	+				-1.3
3,744,215	+		PGA1_c35710	0.10	+1.1
3,744,215	+		PGA1_c35710	0.10	-1.4
3,744,215	+		PGA1_c35710	0.10	-1.3
3,744,215	+		PGA1_c35710	0.10	-1.7
3,744,215	+		PGA1_c35710	0.10	-2.5
3,744,215	+		PGA1_c35710	0.10	-0.7
3,744,223	-		PGA1_c35710	0.11	-0.5
3,744,223	-		PGA1_c35710	0.11	-1.4
3,744,223	-		PGA1_c35710	0.11	-1.0
3,744,223	-		PGA1_c35710	0.11	-1.1
3,744,223	-		PGA1_c35710	0.11	-3.0
3,744,256	-		PGA1_c35710	0.12	+0.1
3,744,276	+		PGA1_c35710	0.13	-1.7
3,744,278	-		PGA1_c35710	0.13	-1.0
3,744,284	-		PGA1_c35710	0.14	-2.9
3,744,284	-		PGA1_c35710	0.14	+0.5
3,744,304	+		PGA1_c35710	0.15	-0.2
3,744,352	+		PGA1_c35710	0.17	-1.3
3,744,360	+		PGA1_c35710	0.17	-0.7
3,744,426	-		PGA1_c35710	0.20	-0.9
3,744,470	-		PGA1_c35710	0.23	+0.1
3,744,530	+		PGA1_c35710	0.25	-1.3
3,744,530	+		PGA1_c35710	0.25	-1.5
3,744,530	+		PGA1_c35710	0.25	+0.4
3,744,645	+		PGA1_c35710	0.31	-1.7
3,744,648	-		PGA1_c35710	0.31	-1.0
3,744,648	-		PGA1_c35710	0.31	-0.5
3,744,653	-		PGA1_c35710	0.31	-0.7
3,744,687	-		PGA1_c35710	0.33	-1.3
3,744,706	-		PGA1_c35710	0.34	-0.9
3,744,722	+		PGA1_c35710	0.35	-1.6
3,744,722	+		PGA1_c35710	0.35	-1.0
3,744,729	-		PGA1_c35710	0.35	-2.6
3,744,766	+		PGA1_c35710	0.37	-1.8
3,744,796	-		PGA1_c35710	0.38	-1.5
3,744,909	+		PGA1_c35710	0.44	-1.5
3,744,925	+		PGA1_c35710	0.44	-0.7
3,744,925	+		PGA1_c35710	0.44	-1.2
3,744,933	+		PGA1_c35710	0.45	-1.4
3,744,933	+		PGA1_c35710	0.45	-0.2
3,744,933	+		PGA1_c35710	0.45	+0.2
3,744,933	+		PGA1_c35710	0.45	-0.1
3,744,933	+		PGA1_c35710	0.45	-1.6
3,744,933	+		PGA1_c35710	0.45	+0.5
3,744,941	-		PGA1_c35710	0.45	-0.9
3,744,941	-		PGA1_c35710	0.45	-1.5
3,744,941	-		PGA1_c35710	0.45	-0.6
3,744,962	+		PGA1_c35710	0.46	-0.0
3,744,994	+		PGA1_c35710	0.48	-1.0
3,745,089	+		PGA1_c35710	0.52	-2.1
3,745,089	+		PGA1_c35710	0.52	+0.2
3,745,097	-		PGA1_c35710	0.52	-0.9
3,745,150	+		PGA1_c35710	0.55	+0.2
3,745,224	-		PGA1_c35710	0.59	-0.0
3,745,257	-		PGA1_c35710	0.60	-2.9
3,745,257	-		PGA1_c35710	0.60	-0.5
3,745,257	-		PGA1_c35710	0.60	-1.2
3,745,262	+		PGA1_c35710	0.60	+0.2
3,745,262	+		PGA1_c35710	0.60	-0.9
3,745,270	-		PGA1_c35710	0.61	-2.6
3,745,330	+		PGA1_c35710	0.64	-0.6
3,745,333	-		PGA1_c35710	0.64	-1.2
3,745,333	-		PGA1_c35710	0.64	-1.2
3,745,333	-		PGA1_c35710	0.64	-0.8
3,745,338	-		PGA1_c35710	0.64	-0.3
3,745,338	-		PGA1_c35710	0.64	-0.8
3,745,338	-		PGA1_c35710	0.64	-1.2
3,745,338	-		PGA1_c35710	0.64	-0.7
3,745,338	-		PGA1_c35710	0.64	-1.3
3,745,344	+		PGA1_c35710	0.64	-0.8
3,745,352	-		PGA1_c35710	0.65	-0.5
3,745,388	+		PGA1_c35710	0.66	-1.0
3,745,413	+		PGA1_c35710	0.68	-0.9
3,745,477	+		PGA1_c35710	0.71	-1.1
3,745,601	+		PGA1_c35710	0.77	-2.2
3,745,604	+		PGA1_c35710	0.77	-0.1
3,745,623	-		PGA1_c35710	0.78	-0.6
3,745,624	-		PGA1_c35710	0.78	-1.7
3,745,689	-		PGA1_c35710	0.81	-0.7
3,745,692	+		PGA1_c35710	0.81	-0.9
3,745,777	+		PGA1_c35710	0.85	-0.8
3,745,784	+		PGA1_c35710	0.85	-0.7
3,745,846	+		PGA1_c35710	0.88	-0.7
3,745,877	+		PGA1_c35710	0.90	-0.5
3,745,885	-				-1.5
3,745,915	-				-0.2
3,745,957	+				-2.5
3,745,965	-				-1.4
3,745,967	+				-1.1
3,745,972	-				-2.1
3,746,029	-				-0.6
3,746,029	-				-2.0
3,746,041	-				-0.7
3,746,043	+				-0.1
3,746,051	-				-0.8
3,746,130	-				-0.4
3,746,181	+		PGA1_c35720	0.12	-1.2
3,746,225	+		PGA1_c35720	0.18	-1.7
3,746,225	+		PGA1_c35720	0.18	-1.6
3,746,271	+		PGA1_c35720	0.23	-1.2
3,746,422	+		PGA1_c35720	0.43	-1.2
3,746,422	+		PGA1_c35720	0.43	-0.4
3,746,422	+		PGA1_c35720	0.43	-0.6
3,746,488	+		PGA1_c35720	0.51	-0.9
3,746,496	-		PGA1_c35720	0.52	-1.4
3,746,528	-		PGA1_c35720	0.56	-0.5
3,746,555	-		PGA1_c35720	0.60	-0.6
3,746,590	+		PGA1_c35720	0.64	+0.2
3,746,598	-		PGA1_c35720	0.65	-0.4
3,746,603	+		PGA1_c35720	0.66	-1.8
3,746,634	+		PGA1_c35720	0.70	-0.8
3,746,689	+		PGA1_c35720	0.77	-0.9
3,746,697	-		PGA1_c35720	0.78	-0.8
3,746,703	+		PGA1_c35720	0.79	-1.5
3,746,707	-		PGA1_c35720	0.79	+0.5
3,746,708	+		PGA1_c35720	0.79	-1.1
3,746,711	-		PGA1_c35720	0.80	-1.4
3,746,729	+		PGA1_c35720	0.82	-0.1
3,746,757	-		PGA1_c35720	0.86	-1.5
3,746,770	-		PGA1_c35720	0.87	-0.7
3,746,816	-				-0.4
3,746,894	-				-1.1
3,746,903	-				-1.6
3,746,911	-				-0.9
3,746,939	+				-1.5
3,746,959	+				-0.3
3,746,964	-				+0.4
3,747,017	-		PGA1_c35730	0.14	+0.1
3,747,034	-		PGA1_c35730	0.16	-1.2
3,747,050	+		PGA1_c35730	0.17	-1.6
3,747,063	-		PGA1_c35730	0.18	-0.4