Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3381 and HP15_3382 are separated by 170 nucleotides HP15_3382 and HP15_3383 are separated by 82 nucleotides HP15_3383 and HP15_3384 are separated by 41 nucleotides HP15_3384 and HP15_3385 are separated by 152 nucleotides
HP15_3381: HP15_3381 - MscS mechanosensitive ion channel, at 3,549,918 to 3,550,751
_3381
HP15_3382: HP15_3382 - YbaK/prolyl-tRNA synthetase associated region, at 3,550,922 to 3,551,479
_3382
HP15_3383: HP15_3383 - ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family, at 3,551,562 to 3,552,857
_3383
HP15_3384: HP15_3384 - HIT (histidine triad) family protein, at 3,552,899 to 3,553,264
_3384
HP15_3385: HP15_3385 - phosphate uptake regulator, PhoU, at 3,553,417 to 3,554,154
_3385
Position (kb)
3551
3552
3553 Strain fitness (log2 ratio)
-1
0
1 at 3550.574 kb on - strand, within HP15_3381 at 3550.744 kb on - strand at 3550.806 kb on - strand at 3550.806 kb on - strand at 3550.807 kb on + strand at 3550.981 kb on + strand, within HP15_3382 at 3550.988 kb on - strand, within HP15_3382 at 3551.226 kb on + strand, within HP15_3382 at 3551.430 kb on + strand at 3551.433 kb on - strand at 3551.438 kb on - strand at 3551.455 kb on + strand at 3551.542 kb on + strand at 3552.801 kb on - strand at 3552.849 kb on - strand at 3552.979 kb on - strand, within HP15_3384 at 3552.980 kb on - strand, within HP15_3384 at 3553.086 kb on - strand, within HP15_3384 at 3553.151 kb on + strand, within HP15_3384 at 3553.220 kb on + strand, within HP15_3384 at 3553.220 kb on + strand, within HP15_3384 at 3553.228 kb on - strand at 3553.228 kb on - strand at 3553.278 kb on + strand at 3553.320 kb on + strand at 3553.361 kb on - strand at 3553.398 kb on + strand at 3553.410 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 3,550,574 - HP15_3381 0.79 +0.0 3,550,744 - +0.2 3,550,806 - +0.3 3,550,806 - +0.0 3,550,807 + +0.3 3,550,981 + HP15_3382 0.11 -0.2 3,550,988 - HP15_3382 0.12 -0.8 3,551,226 + HP15_3382 0.54 -0.1 3,551,430 + +0.2 3,551,433 - -1.7 3,551,438 - -0.5 3,551,455 + +0.4 3,551,542 + -0.3 3,552,801 - -0.9 3,552,849 - -1.7 3,552,979 - HP15_3384 0.22 +0.1 3,552,980 - HP15_3384 0.22 -0.0 3,553,086 - HP15_3384 0.51 +0.0 3,553,151 + HP15_3384 0.69 +0.2 3,553,220 + HP15_3384 0.88 +0.2 3,553,220 + HP15_3384 0.88 +0.2 3,553,228 - -0.5 3,553,228 - +0.3 3,553,278 + +0.3 3,553,320 + +0.1 3,553,361 - +0.9 3,553,398 + +0.1 3,553,410 + +0.3
Or see this region's nucleotide sequence