Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3333 and HP15_3334 are separated by 21 nucleotides HP15_3334 and HP15_3335 are separated by 49 nucleotides
HP15_3333: HP15_3333 - membrane protein YdgA-like protein, at 3,493,495 to 3,494,784
_3333
HP15_3334: HP15_3334 - polyphosphate kinase, at 3,494,806 to 3,496,947
_3334
HP15_3335: HP15_3335 - delta-aminolevulinic acid dehydratase, at 3,496,997 to 3,498,016
_3335
Position (kb)
3494
3495
3496
3497 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3493.873 kb on - strand, within HP15_3333 at 3493.893 kb on + strand, within HP15_3333 at 3493.959 kb on - strand, within HP15_3333 at 3494.003 kb on + strand, within HP15_3333 at 3494.003 kb on + strand, within HP15_3333 at 3494.003 kb on + strand, within HP15_3333 at 3494.038 kb on + strand, within HP15_3333 at 3494.064 kb on - strand, within HP15_3333 at 3494.082 kb on + strand, within HP15_3333 at 3494.177 kb on - strand, within HP15_3333 at 3494.180 kb on + strand, within HP15_3333 at 3494.188 kb on - strand, within HP15_3333 at 3494.228 kb on + strand, within HP15_3333 at 3494.257 kb on + strand, within HP15_3333 at 3494.262 kb on + strand, within HP15_3333 at 3494.262 kb on + strand, within HP15_3333 at 3494.262 kb on + strand, within HP15_3333 at 3494.270 kb on - strand, within HP15_3333 at 3494.270 kb on - strand, within HP15_3333 at 3494.270 kb on - strand, within HP15_3333 at 3494.542 kb on - strand, within HP15_3333 at 3494.542 kb on - strand, within HP15_3333 at 3494.555 kb on - strand, within HP15_3333 at 3494.656 kb on + strand at 3494.674 kb on - strand at 3494.720 kb on + strand at 3494.720 kb on + strand at 3494.720 kb on + strand at 3494.728 kb on - strand at 3494.728 kb on - strand at 3494.728 kb on - strand at 3494.865 kb on - strand at 3494.894 kb on - strand at 3494.904 kb on + strand at 3494.959 kb on - strand at 3495.202 kb on + strand, within HP15_3334 at 3495.232 kb on - strand, within HP15_3334 at 3495.331 kb on + strand, within HP15_3334 at 3495.368 kb on + strand, within HP15_3334 at 3495.368 kb on + strand, within HP15_3334 at 3495.460 kb on - strand, within HP15_3334 at 3495.594 kb on - strand, within HP15_3334 at 3495.929 kb on - strand, within HP15_3334 at 3495.963 kb on - strand, within HP15_3334 at 3496.016 kb on - strand, within HP15_3334 at 3496.104 kb on - strand, within HP15_3334 at 3496.160 kb on + strand, within HP15_3334 at 3496.177 kb on - strand, within HP15_3334 at 3496.285 kb on - strand, within HP15_3334 at 3496.430 kb on - strand, within HP15_3334 at 3496.444 kb on - strand, within HP15_3334 at 3496.489 kb on - strand, within HP15_3334 at 3496.536 kb on - strand, within HP15_3334 at 3496.576 kb on - strand, within HP15_3334 at 3496.604 kb on + strand, within HP15_3334 at 3496.854 kb on + strand at 3496.973 kb on - strand at 3496.996 kb on - strand at 3497.021 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 3,493,873 - HP15_3333 0.29 -0.1 3,493,893 + HP15_3333 0.31 +1.5 3,493,959 - HP15_3333 0.36 -0.5 3,494,003 + HP15_3333 0.39 -0.0 3,494,003 + HP15_3333 0.39 -0.1 3,494,003 + HP15_3333 0.39 -0.3 3,494,038 + HP15_3333 0.42 -0.2 3,494,064 - HP15_3333 0.44 -0.3 3,494,082 + HP15_3333 0.46 +0.2 3,494,177 - HP15_3333 0.53 -0.4 3,494,180 + HP15_3333 0.53 +0.2 3,494,188 - HP15_3333 0.54 -0.4 3,494,228 + HP15_3333 0.57 -0.4 3,494,257 + HP15_3333 0.59 -0.5 3,494,262 + HP15_3333 0.59 -0.2 3,494,262 + HP15_3333 0.59 -1.4 3,494,262 + HP15_3333 0.59 -0.3 3,494,270 - HP15_3333 0.60 +1.9 3,494,270 - HP15_3333 0.60 -0.7 3,494,270 - HP15_3333 0.60 -0.3 3,494,542 - HP15_3333 0.81 -0.1 3,494,542 - HP15_3333 0.81 +0.6 3,494,555 - HP15_3333 0.82 -1.6 3,494,656 + -0.5 3,494,674 - -0.1 3,494,720 + +0.0 3,494,720 + +0.8 3,494,720 + -0.3 3,494,728 - -1.1 3,494,728 - -0.3 3,494,728 - -2.3 3,494,865 - -0.1 3,494,894 - +1.3 3,494,904 + +0.7 3,494,959 - +0.5 3,495,202 + HP15_3334 0.18 +0.8 3,495,232 - HP15_3334 0.20 +1.4 3,495,331 + HP15_3334 0.25 +1.0 3,495,368 + HP15_3334 0.26 +0.6 3,495,368 + HP15_3334 0.26 +0.1 3,495,460 - HP15_3334 0.31 +1.0 3,495,594 - HP15_3334 0.37 +0.3 3,495,929 - HP15_3334 0.52 +1.1 3,495,963 - HP15_3334 0.54 +1.7 3,496,016 - HP15_3334 0.56 +1.2 3,496,104 - HP15_3334 0.61 +1.5 3,496,160 + HP15_3334 0.63 +2.5 3,496,177 - HP15_3334 0.64 +0.9 3,496,285 - HP15_3334 0.69 +1.1 3,496,430 - HP15_3334 0.76 +0.2 3,496,444 - HP15_3334 0.76 +1.1 3,496,489 - HP15_3334 0.79 +1.1 3,496,536 - HP15_3334 0.81 +0.8 3,496,576 - HP15_3334 0.83 +1.6 3,496,604 + HP15_3334 0.84 +1.2 3,496,854 + +0.3 3,496,973 - +0.0 3,496,996 - +0.3 3,497,021 - +0.3
Or see this region's nucleotide sequence