Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3316 and HP15_3317 are separated by 24 nucleotides HP15_3317 and HP15_3318 are separated by 57 nucleotides
HP15_3316: HP15_3316 - acetylornithine deacetylase, at 3,476,407 to 3,477,657
_3316
HP15_3317: HP15_3317 - acetylglutamate kinase, at 3,477,682 to 3,478,578
_3317
HP15_3318: HP15_3318 - phosphomannomutase, at 3,478,636 to 3,481,278
_3318
Position (kb)
3477
3478
3479 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3476.724 kb on + strand, within HP15_3316 at 3476.845 kb on - strand, within HP15_3316 at 3477.086 kb on + strand, within HP15_3316 at 3477.086 kb on + strand, within HP15_3316 at 3477.104 kb on - strand, within HP15_3316 at 3477.112 kb on + strand, within HP15_3316 at 3477.123 kb on - strand, within HP15_3316 at 3477.204 kb on - strand, within HP15_3316 at 3477.204 kb on - strand, within HP15_3316 at 3477.236 kb on - strand, within HP15_3316 at 3477.323 kb on - strand, within HP15_3316 at 3477.323 kb on - strand, within HP15_3316 at 3477.327 kb on + strand, within HP15_3316 at 3477.327 kb on + strand, within HP15_3316 at 3477.327 kb on + strand, within HP15_3316 at 3477.327 kb on + strand, within HP15_3316 at 3477.327 kb on + strand, within HP15_3316 at 3477.327 kb on + strand, within HP15_3316 at 3477.335 kb on - strand, within HP15_3316 at 3477.335 kb on - strand, within HP15_3316 at 3477.350 kb on + strand, within HP15_3316 at 3477.399 kb on + strand, within HP15_3316 at 3477.506 kb on + strand, within HP15_3316 at 3477.523 kb on + strand, within HP15_3316 at 3477.523 kb on + strand, within HP15_3316 at 3477.531 kb on - strand, within HP15_3316 at 3477.531 kb on - strand, within HP15_3316 at 3477.531 kb on - strand, within HP15_3316 at 3477.531 kb on - strand, within HP15_3316 at 3477.531 kb on - strand, within HP15_3316 at 3477.584 kb on + strand at 3477.634 kb on - strand at 3477.796 kb on + strand, within HP15_3317 at 3478.281 kb on - strand, within HP15_3317 at 3478.567 kb on + strand at 3478.691 kb on + strand at 3478.743 kb on + strand at 3478.756 kb on - strand at 3478.855 kb on + strand at 3479.272 kb on + strand, within HP15_3318 at 3479.414 kb on + strand, within HP15_3318 at 3479.448 kb on - strand, within HP15_3318 at 3479.465 kb on - strand, within HP15_3318 at 3479.504 kb on + strand, within HP15_3318 at 3479.505 kb on + strand, within HP15_3318 at 3479.512 kb on - strand, within HP15_3318
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 3,476,724 + HP15_3316 0.25 -1.2 3,476,845 - HP15_3316 0.35 +0.0 3,477,086 + HP15_3316 0.54 -0.7 3,477,086 + HP15_3316 0.54 -0.1 3,477,104 - HP15_3316 0.56 -2.0 3,477,112 + HP15_3316 0.56 -0.7 3,477,123 - HP15_3316 0.57 +0.7 3,477,204 - HP15_3316 0.64 +0.2 3,477,204 - HP15_3316 0.64 +0.4 3,477,236 - HP15_3316 0.66 +0.0 3,477,323 - HP15_3316 0.73 -0.5 3,477,323 - HP15_3316 0.73 +0.4 3,477,327 + HP15_3316 0.74 +0.8 3,477,327 + HP15_3316 0.74 -0.7 3,477,327 + HP15_3316 0.74 +0.5 3,477,327 + HP15_3316 0.74 +0.2 3,477,327 + HP15_3316 0.74 +0.4 3,477,327 + HP15_3316 0.74 -0.1 3,477,335 - HP15_3316 0.74 -1.1 3,477,335 - HP15_3316 0.74 -0.0 3,477,350 + HP15_3316 0.75 -1.2 3,477,399 + HP15_3316 0.79 +0.2 3,477,506 + HP15_3316 0.88 -0.1 3,477,523 + HP15_3316 0.89 +0.9 3,477,523 + HP15_3316 0.89 -0.7 3,477,531 - HP15_3316 0.90 -1.8 3,477,531 - HP15_3316 0.90 -0.1 3,477,531 - HP15_3316 0.90 -0.4 3,477,531 - HP15_3316 0.90 +1.0 3,477,531 - HP15_3316 0.90 -0.6 3,477,584 + -0.2 3,477,634 - -1.2 3,477,796 + HP15_3317 0.13 +1.5 3,478,281 - HP15_3317 0.67 -1.1 3,478,567 + +0.7 3,478,691 + -0.1 3,478,743 + +0.8 3,478,756 - +0.1 3,478,855 + +0.1 3,479,272 + HP15_3318 0.24 +0.5 3,479,414 + HP15_3318 0.29 -0.1 3,479,448 - HP15_3318 0.31 +2.0 3,479,465 - HP15_3318 0.31 +1.2 3,479,504 + HP15_3318 0.33 +0.8 3,479,505 + HP15_3318 0.33 +1.1 3,479,512 - HP15_3318 0.33 +0.5
Or see this region's nucleotide sequence