Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3259 and HP15_3260 are separated by 2 nucleotides HP15_3260 and HP15_3261 are separated by 226 nucleotides HP15_3261 and HP15_3262 overlap by 1 nucleotides
HP15_3259: HP15_3259 - NolW domain protein, at 3,412,919 to 3,413,707
_3259
HP15_3260: HP15_3260 - heat shock protein DnaJ domain protein, at 3,413,710 to 3,414,216
_3260
HP15_3261: HP15_3261 - efflux transporter, RND family, MFP subunit, at 3,414,443 to 3,415,543
_3261
HP15_3262: HP15_3262 - multidrug resistance protein, at 3,415,543 to 3,418,632
_3262
Position (kb)
3414
3415
3416 Strain fitness (log2 ratio)
-2
-1
0
1 at 3413.586 kb on + strand, within HP15_3259 at 3413.616 kb on + strand, within HP15_3259 at 3413.676 kb on + strand at 3413.691 kb on + strand at 3414.087 kb on + strand, within HP15_3260 at 3414.276 kb on - strand at 3414.501 kb on - strand at 3414.731 kb on + strand, within HP15_3261 at 3414.731 kb on + strand, within HP15_3261 at 3414.739 kb on - strand, within HP15_3261 at 3414.739 kb on - strand, within HP15_3261 at 3414.822 kb on + strand, within HP15_3261 at 3414.950 kb on + strand, within HP15_3261 at 3415.061 kb on - strand, within HP15_3261 at 3415.061 kb on - strand, within HP15_3261 at 3415.133 kb on - strand, within HP15_3261 at 3415.136 kb on + strand, within HP15_3261 at 3415.163 kb on - strand, within HP15_3261 at 3415.183 kb on + strand, within HP15_3261 at 3415.184 kb on - strand, within HP15_3261 at 3415.201 kb on - strand, within HP15_3261 at 3415.201 kb on - strand, within HP15_3261 at 3415.201 kb on - strand, within HP15_3261 at 3415.203 kb on + strand, within HP15_3261 at 3415.221 kb on - strand, within HP15_3261 at 3415.303 kb on - strand, within HP15_3261 at 3415.559 kb on + strand at 3415.660 kb on - strand at 3415.706 kb on + strand at 3415.706 kb on + strand at 3415.714 kb on - strand at 3415.850 kb on - strand at 3415.850 kb on - strand at 3415.910 kb on + strand, within HP15_3262 at 3415.951 kb on + strand, within HP15_3262 at 3416.018 kb on + strand, within HP15_3262 at 3416.023 kb on + strand, within HP15_3262 at 3416.028 kb on + strand, within HP15_3262 at 3416.182 kb on + strand, within HP15_3262 at 3416.201 kb on - strand, within HP15_3262 at 3416.280 kb on + strand, within HP15_3262 at 3416.288 kb on - strand, within HP15_3262 at 3416.290 kb on + strand, within HP15_3262 at 3416.290 kb on + strand, within HP15_3262 at 3416.328 kb on - strand, within HP15_3262 at 3416.364 kb on - strand, within HP15_3262 at 3416.433 kb on + strand, within HP15_3262
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 3,413,586 + HP15_3259 0.85 +0.2 3,413,616 + HP15_3259 0.88 +0.2 3,413,676 + -0.1 3,413,691 + -0.0 3,414,087 + HP15_3260 0.74 +0.1 3,414,276 - +0.4 3,414,501 - -1.2 3,414,731 + HP15_3261 0.26 -1.5 3,414,731 + HP15_3261 0.26 -2.0 3,414,739 - HP15_3261 0.27 -1.8 3,414,739 - HP15_3261 0.27 -1.5 3,414,822 + HP15_3261 0.34 -1.8 3,414,950 + HP15_3261 0.46 -0.5 3,415,061 - HP15_3261 0.56 -0.9 3,415,061 - HP15_3261 0.56 -1.5 3,415,133 - HP15_3261 0.63 -0.1 3,415,136 + HP15_3261 0.63 -1.0 3,415,163 - HP15_3261 0.65 -2.1 3,415,183 + HP15_3261 0.67 -0.1 3,415,184 - HP15_3261 0.67 -1.6 3,415,201 - HP15_3261 0.69 -1.3 3,415,201 - HP15_3261 0.69 -0.7 3,415,201 - HP15_3261 0.69 -1.3 3,415,203 + HP15_3261 0.69 +0.2 3,415,221 - HP15_3261 0.71 -0.6 3,415,303 - HP15_3261 0.78 -1.8 3,415,559 + -1.4 3,415,660 - -1.3 3,415,706 + +0.6 3,415,706 + -1.3 3,415,714 - -1.3 3,415,850 - -0.9 3,415,850 - +0.1 3,415,910 + HP15_3262 0.12 -0.4 3,415,951 + HP15_3262 0.13 -1.6 3,416,018 + HP15_3262 0.15 -1.7 3,416,023 + HP15_3262 0.16 -1.6 3,416,028 + HP15_3262 0.16 -1.6 3,416,182 + HP15_3262 0.21 -1.2 3,416,201 - HP15_3262 0.21 -1.3 3,416,280 + HP15_3262 0.24 +1.7 3,416,288 - HP15_3262 0.24 -1.5 3,416,290 + HP15_3262 0.24 -1.3 3,416,290 + HP15_3262 0.24 +0.7 3,416,328 - HP15_3262 0.25 -1.1 3,416,364 - HP15_3262 0.27 -1.0 3,416,433 + HP15_3262 0.29 -1.0
Or see this region's nucleotide sequence