Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3222 and HP15_3223 are separated by 2 nucleotides HP15_3223 and HP15_3224 are separated by 61 nucleotides
HP15_3222: HP15_3222 - acetyl-CoA carboxylase biotin carboxylase subunit, at 3,374,025 to 3,375,371
_3222
HP15_3223: HP15_3223 - ribosomal protein L11 methyltransferase, at 3,375,374 to 3,376,270
_3223
HP15_3224: HP15_3224 - family finger-like protein, at 3,376,332 to 3,377,588
_3224
Position (kb)
3375
3376
3377 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3375.389 kb on - strand at 3375.404 kb on + strand at 3375.404 kb on + strand at 3375.490 kb on - strand, within HP15_3223 at 3375.577 kb on + strand, within HP15_3223 at 3375.600 kb on + strand, within HP15_3223 at 3375.639 kb on + strand, within HP15_3223 at 3375.669 kb on - strand, within HP15_3223 at 3375.673 kb on + strand, within HP15_3223 at 3375.723 kb on - strand, within HP15_3223 at 3375.916 kb on - strand, within HP15_3223 at 3375.924 kb on - strand, within HP15_3223 at 3375.928 kb on - strand, within HP15_3223 at 3375.962 kb on + strand, within HP15_3223 at 3376.014 kb on - strand, within HP15_3223 at 3376.021 kb on + strand, within HP15_3223 at 3376.056 kb on + strand, within HP15_3223 at 3376.103 kb on - strand, within HP15_3223 at 3376.223 kb on - strand at 3376.223 kb on - strand at 3376.316 kb on - strand at 3376.387 kb on - strand at 3376.398 kb on - strand at 3376.528 kb on - strand, within HP15_3224 at 3376.566 kb on - strand, within HP15_3224 at 3376.646 kb on - strand, within HP15_3224 at 3376.681 kb on + strand, within HP15_3224 at 3376.689 kb on - strand, within HP15_3224 at 3376.689 kb on - strand, within HP15_3224 at 3376.817 kb on + strand, within HP15_3224 at 3376.825 kb on - strand, within HP15_3224 at 3376.868 kb on + strand, within HP15_3224 at 3376.898 kb on - strand, within HP15_3224 at 3376.939 kb on + strand, within HP15_3224 at 3376.948 kb on + strand, within HP15_3224 at 3377.118 kb on + strand, within HP15_3224 at 3377.126 kb on - strand, within HP15_3224 at 3377.144 kb on - strand, within HP15_3224 at 3377.147 kb on + strand, within HP15_3224 at 3377.203 kb on + strand, within HP15_3224 at 3377.211 kb on - strand, within HP15_3224 at 3377.211 kb on - strand, within HP15_3224 at 3377.211 kb on - strand, within HP15_3224 at 3377.241 kb on - strand, within HP15_3224 at 3377.270 kb on - strand, within HP15_3224
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 3,375,389 - +1.8 3,375,404 + +1.0 3,375,404 + +1.2 3,375,490 - HP15_3223 0.13 +0.9 3,375,577 + HP15_3223 0.23 -0.5 3,375,600 + HP15_3223 0.25 +0.1 3,375,639 + HP15_3223 0.30 +0.9 3,375,669 - HP15_3223 0.33 +3.0 3,375,673 + HP15_3223 0.33 +0.8 3,375,723 - HP15_3223 0.39 +0.5 3,375,916 - HP15_3223 0.60 +0.3 3,375,924 - HP15_3223 0.61 +1.4 3,375,928 - HP15_3223 0.62 +1.1 3,375,962 + HP15_3223 0.66 +0.4 3,376,014 - HP15_3223 0.71 +0.0 3,376,021 + HP15_3223 0.72 +0.8 3,376,056 + HP15_3223 0.76 +0.0 3,376,103 - HP15_3223 0.81 +0.6 3,376,223 - +0.2 3,376,223 - +0.9 3,376,316 - -1.2 3,376,387 - +0.3 3,376,398 - +0.0 3,376,528 - HP15_3224 0.16 -0.9 3,376,566 - HP15_3224 0.19 -1.4 3,376,646 - HP15_3224 0.25 +0.2 3,376,681 + HP15_3224 0.28 +1.2 3,376,689 - HP15_3224 0.28 +0.7 3,376,689 - HP15_3224 0.28 -0.6 3,376,817 + HP15_3224 0.39 -0.6 3,376,825 - HP15_3224 0.39 -0.5 3,376,868 + HP15_3224 0.43 -0.3 3,376,898 - HP15_3224 0.45 -1.6 3,376,939 + HP15_3224 0.48 -0.4 3,376,948 + HP15_3224 0.49 -1.3 3,377,118 + HP15_3224 0.63 +0.2 3,377,126 - HP15_3224 0.63 +0.3 3,377,144 - HP15_3224 0.65 -0.2 3,377,147 + HP15_3224 0.65 +0.3 3,377,203 + HP15_3224 0.69 -1.7 3,377,211 - HP15_3224 0.70 -0.8 3,377,211 - HP15_3224 0.70 -1.8 3,377,211 - HP15_3224 0.70 -1.3 3,377,241 - HP15_3224 0.72 -0.6 3,377,270 - HP15_3224 0.75 -0.4
Or see this region's nucleotide sequence