Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32950

Experiment: L-Glutamine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)
3,452,417	+		PGA1_c32930	0.82	+0.5
3,452,425	-		PGA1_c32930	0.84	+0.4
3,452,546	-				-0.1
3,452,581	-		PGA1_c32940	0.10	+0.4
3,452,603	-		PGA1_c32940	0.13	+0.5
3,452,645	+		PGA1_c32940	0.19	+0.3
3,452,653	-		PGA1_c32940	0.20	+0.2
3,452,653	-		PGA1_c32940	0.20	-0.5
3,452,667	+		PGA1_c32940	0.22	+1.3
3,452,691	+		PGA1_c32940	0.25	-1.1
3,452,699	-		PGA1_c32940	0.26	+0.9
3,452,775	+		PGA1_c32940	0.37	-0.0
3,452,825	+		PGA1_c32940	0.43	-0.1
3,452,865	-		PGA1_c32940	0.49	+0.9
3,452,881	+		PGA1_c32940	0.51	+0.0
3,452,899	-		PGA1_c32940	0.53	+0.2
3,452,919	-		PGA1_c32940	0.56	+0.1
3,453,011	-		PGA1_c32940	0.69	+1.1
3,453,033	+		PGA1_c32940	0.72	+0.4
3,453,041	-		PGA1_c32940	0.73	+0.7
3,453,041	-		PGA1_c32940	0.73	+0.5
3,453,081	+		PGA1_c32940	0.78	-0.3
3,453,083	+		PGA1_c32940	0.78	+0.0
3,453,091	-		PGA1_c32940	0.79	-0.4
3,453,091	-		PGA1_c32940	0.79	+0.4
3,453,091	-		PGA1_c32940	0.79	-0.1
3,453,148	-		PGA1_c32940	0.87	+0.7
3,453,184	-				+0.7
3,453,195	-				+0.0
3,453,233	+				-0.4
3,453,271	+				+0.2
3,453,322	+				+0.5
3,453,434	+				-0.7
3,453,436	+				-0.5
3,453,441	+				-1.0
3,453,455	-				-1.1
3,453,499	+		PGA1_c32950	0.14	-0.4
3,453,502	-		PGA1_c32950	0.14	-0.6
3,453,579	+		PGA1_c32950	0.23	-1.1
3,453,592	+		PGA1_c32950	0.24	-1.9
3,453,600	-		PGA1_c32950	0.25	+1.0
3,453,777	+		PGA1_c32950	0.44	-1.1
3,453,777	+		PGA1_c32950	0.44	-0.5
3,453,785	-		PGA1_c32950	0.45	-1.0
3,453,785	-		PGA1_c32950	0.45	-1.3
3,453,785	-		PGA1_c32950	0.45	-2.3
3,453,785	-		PGA1_c32950	0.45	-1.1
3,453,785	-		PGA1_c32950	0.45	-2.3
3,453,785	-		PGA1_c32950	0.45	-0.9
3,453,785	-		PGA1_c32950	0.45	-0.7
3,453,834	-		PGA1_c32950	0.51	-2.2
3,453,871	-		PGA1_c32950	0.55	-0.8
3,453,928	+		PGA1_c32950	0.61	-0.4
3,453,982	-		PGA1_c32950	0.67	-0.6
3,453,984	+		PGA1_c32950	0.67	-0.9
3,453,984	+		PGA1_c32950	0.67	-0.1
3,453,992	-		PGA1_c32950	0.68	-1.0
3,453,992	-		PGA1_c32950	0.68	-0.7
3,454,017	+		PGA1_c32950	0.71	-0.3
3,454,017	+		PGA1_c32950	0.71	-0.4
3,454,019	-		PGA1_c32950	0.71	-0.8
3,454,039	+		PGA1_c32950	0.73	-0.2
3,454,047	-		PGA1_c32950	0.74	-0.9
3,454,108	+		PGA1_c32950	0.81	-0.5
3,454,118	+		PGA1_c32950	0.82	-0.5
3,454,126	-		PGA1_c32950	0.83	+0.5
3,454,187	+		PGA1_c32950	0.90	-1.0
3,454,200	-				-2.3
3,454,242	-				-1.5
3,454,242	-				-2.3
3,454,355	+				+0.6
3,454,356	+				+0.4
3,454,386	-		PGA1_c32960	0.12	-1.3
3,454,393	+		PGA1_c32960	0.13	+0.1
3,454,396	-		PGA1_c32960	0.14	-0.4
3,454,401	-		PGA1_c32960	0.15	+0.2
3,454,456	-		PGA1_c32960	0.26	-0.3
3,454,462	+		PGA1_c32960	0.27	-0.1
3,454,473	+		PGA1_c32960	0.29	+0.2
3,454,481	-		PGA1_c32960	0.30	-0.2
3,454,497	-		PGA1_c32960	0.34	+0.4
3,454,519	+		PGA1_c32960	0.38	-0.6
3,454,519	+		PGA1_c32960	0.38	-0.1
3,454,519	+		PGA1_c32960	0.38	-0.0
3,454,519	+		PGA1_c32960	0.38	-0.3
3,454,527	-		PGA1_c32960	0.39	-0.2
3,454,527	-		PGA1_c32960	0.39	-0.2
3,454,527	-		PGA1_c32960	0.39	+0.3
3,454,527	-		PGA1_c32960	0.39	+1.1
3,454,567	+		PGA1_c32960	0.47	-0.0
3,454,575	-		PGA1_c32960	0.49	-0.3
3,454,575	-		PGA1_c32960	0.49	-0.0
3,454,575	-		PGA1_c32960	0.49	+0.3
3,454,575	-		PGA1_c32960	0.49	-0.6
3,454,575	-		PGA1_c32960	0.49	-0.2
3,454,575	-		PGA1_c32960	0.49	-0.4
3,454,612	-		PGA1_c32960	0.56	+0.4
3,454,612	-		PGA1_c32960	0.56	-0.1
3,454,612	-		PGA1_c32960	0.56	+0.1
3,454,656	-		PGA1_c32960	0.64	+1.4
3,454,656	-		PGA1_c32960	0.64	-0.5
3,454,661	-		PGA1_c32960	0.65	-1.6
3,454,686	-		PGA1_c32960	0.70	-0.2
3,454,717	-		PGA1_c32960	0.76	-0.8
3,454,727	-		PGA1_c32960	0.78	+0.7
3,454,750	+		PGA1_c32960	0.82	-0.5
3,454,758	-		PGA1_c32960	0.84	-0.3
3,454,760	+		PGA1_c32960	0.84	+0.2
3,454,760	+		PGA1_c32960	0.84	-0.6
3,454,760	+		PGA1_c32960	0.84	+1.0
3,454,760	+		PGA1_c32960	0.84	-2.0
3,454,760	+		PGA1_c32960	0.84	+0.2
3,454,760	+		PGA1_c32960	0.84	+0.4
3,454,760	+		PGA1_c32960	0.84	+0.1
3,454,760	+		PGA1_c32960	0.84	+0.2
3,454,760	+		PGA1_c32960	0.84	+0.4
3,454,760	+		PGA1_c32960	0.84	+0.0
3,454,760	+		PGA1_c32960	0.84	-0.5
3,454,760	+		PGA1_c32960	0.84	+0.3
3,454,760	+		PGA1_c32960	0.84	+1.6
3,454,760	+		PGA1_c32960	0.84	-0.3
3,454,760	+		PGA1_c32960	0.84	-0.4
3,454,760	+		PGA1_c32960	0.84	+0.1
3,454,760	+		PGA1_c32960	0.84	+0.6
3,454,760	+		PGA1_c32960	0.84	-0.0
3,454,760	+		PGA1_c32960	0.84	-0.9
3,454,760	+		PGA1_c32960	0.84	-0.3
3,454,760	+		PGA1_c32960	0.84	+0.4
3,454,760	+		PGA1_c32960	0.84	+0.0
3,454,760	+		PGA1_c32960	0.84	-1.8
3,454,760	+		PGA1_c32960	0.84	+0.7
3,454,760	+		PGA1_c32960	0.84	+0.1
3,454,760	+		PGA1_c32960	0.84	+0.0
3,454,760	+		PGA1_c32960	0.84	+0.5
3,454,760	+		PGA1_c32960	0.84	-0.0
3,454,760	+		PGA1_c32960	0.84	-0.9
3,454,760	+		PGA1_c32960	0.84	-0.1
3,454,768	-		PGA1_c32960	0.86	-0.6
3,454,768	-		PGA1_c32960	0.86	-0.4
3,454,768	-		PGA1_c32960	0.86	-0.6
3,454,768	-		PGA1_c32960	0.86	+0.0
3,454,768	-		PGA1_c32960	0.86	-1.6
3,454,768	-		PGA1_c32960	0.86	-1.8
3,454,768	-		PGA1_c32960	0.86	+0.6
3,454,768	-		PGA1_c32960	0.86	+0.4
3,454,768	-		PGA1_c32960	0.86	-1.0
3,454,768	-		PGA1_c32960	0.86	+0.5
3,454,768	-		PGA1_c32960	0.86	-0.5
3,454,768	-		PGA1_c32960	0.86	-0.1
3,454,768	-		PGA1_c32960	0.86	+0.1
3,454,768	-		PGA1_c32960	0.86	+0.2
3,454,768	-		PGA1_c32960	0.86	-0.9
3,454,768	-		PGA1_c32960	0.86	-0.2
3,454,768	-		PGA1_c32960	0.86	+0.8
3,454,768	-		PGA1_c32960	0.86	+0.2
3,454,768	-		PGA1_c32960	0.86	-0.6
3,454,768	-		PGA1_c32960	0.86	+0.6
3,454,810	+				-1.7
3,454,812	+				+0.3
3,454,813	-				-0.9
3,454,820	-				-0.5
3,454,826	+				-0.1
3,454,826	+				+0.2
3,454,826	+				+0.0
3,454,826	+				-0.2
3,454,835	+				-0.3
3,454,837	+				+0.1
3,454,902	+				+0.0
3,454,946	+				+0.4
3,454,988	-				-1.2
3,455,014	-				-0.2
3,455,026	-				-0.7
3,455,034	-				-0.8
3,455,034	-				-0.1
3,455,034	-				-0.3
3,455,034	-				-0.6
3,455,034	-				-0.1
3,455,061	+		PGA1_c32970	0.11	+0.8
3,455,085	-		PGA1_c32970	0.13	+0.6
3,455,089	+		PGA1_c32970	0.14	-0.7
3,455,140	+		PGA1_c32970	0.19	-0.2
3,455,140	+		PGA1_c32970	0.19	-0.3
3,455,145	-		PGA1_c32970	0.19	-0.9
3,455,167	+		PGA1_c32970	0.21	-0.6
3,455,176	+		PGA1_c32970	0.22	+1.0
3,455,202	+		PGA1_c32970	0.25	-0.7
3,455,202	+		PGA1_c32970	0.25	-1.0
3,455,202	+		PGA1_c32970	0.25	-0.6
3,455,210	-		PGA1_c32970	0.25	+0.5
3,455,210	-		PGA1_c32970	0.25	-0.2
3,455,210	-		PGA1_c32970	0.25	+1.1
3,455,219	+		PGA1_c32970	0.26	-0.8
3,455,255	+		PGA1_c32970	0.30	+0.3
3,455,256	-		PGA1_c32970	0.30	-1.1
3,455,256	-		PGA1_c32970	0.30	-0.4
3,455,271	-		PGA1_c32970	0.31	-0.6
3,455,276	-		PGA1_c32970	0.32	+0.6