Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3015 and HP15_3016 are separated by 75 nucleotides HP15_3016 and HP15_tRNA48 are separated by 121 nucleotides
HP15_3015: HP15_3015 - A/G-specific adenine glycosylase-like protein, at 3,160,078 to 3,161,145
_3015
HP15_3016: HP15_3016 - Ion traffic superfamily protein, at 3,161,221 to 3,161,493
_3016
HP15_tRNA48: HP15_tRNA48 - tRNA-Phe, at 3,161,615 to 3,161,690
_tRNA48
Position (kb)
3161
3162 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3160.259 kb on + strand, within HP15_3015 at 3160.312 kb on - strand, within HP15_3015 at 3160.431 kb on + strand, within HP15_3015 at 3160.460 kb on - strand, within HP15_3015 at 3160.494 kb on + strand, within HP15_3015 at 3160.597 kb on - strand, within HP15_3015 at 3160.610 kb on + strand, within HP15_3015 at 3160.618 kb on - strand, within HP15_3015 at 3160.711 kb on - strand, within HP15_3015 at 3160.728 kb on - strand, within HP15_3015 at 3160.730 kb on + strand, within HP15_3015 at 3160.883 kb on + strand, within HP15_3015 at 3160.997 kb on - strand, within HP15_3015 at 3160.997 kb on - strand, within HP15_3015 at 3161.142 kb on - strand at 3161.266 kb on + strand, within HP15_3016 at 3161.274 kb on - strand, within HP15_3016 at 3161.281 kb on + strand, within HP15_3016 at 3161.299 kb on + strand, within HP15_3016 at 3161.398 kb on - strand, within HP15_3016 at 3161.460 kb on - strand, within HP15_3016 at 3161.511 kb on - strand at 3161.753 kb on - strand at 3161.797 kb on - strand at 3161.899 kb on + strand at 3161.982 kb on + strand at 3162.086 kb on - strand at 3162.236 kb on - strand at 3162.236 kb on - strand at 3162.247 kb on + strand at 3162.416 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 3,160,259 + HP15_3015 0.17 +0.1 3,160,312 - HP15_3015 0.22 +0.3 3,160,431 + HP15_3015 0.33 +0.1 3,160,460 - HP15_3015 0.36 -1.6 3,160,494 + HP15_3015 0.39 +0.5 3,160,597 - HP15_3015 0.49 -0.0 3,160,610 + HP15_3015 0.50 +0.1 3,160,618 - HP15_3015 0.51 +0.3 3,160,711 - HP15_3015 0.59 +0.7 3,160,728 - HP15_3015 0.61 -0.6 3,160,730 + HP15_3015 0.61 -0.5 3,160,883 + HP15_3015 0.75 -0.4 3,160,997 - HP15_3015 0.86 -1.4 3,160,997 - HP15_3015 0.86 -0.3 3,161,142 - +0.9 3,161,266 + HP15_3016 0.16 +2.3 3,161,274 - HP15_3016 0.19 +1.6 3,161,281 + HP15_3016 0.22 +2.5 3,161,299 + HP15_3016 0.29 +2.1 3,161,398 - HP15_3016 0.65 +1.6 3,161,460 - HP15_3016 0.88 +1.6 3,161,511 - -1.1 3,161,753 - -0.7 3,161,797 - -0.1 3,161,899 + +0.7 3,161,982 + -0.8 3,162,086 - -1.8 3,162,236 - -0.4 3,162,236 - -0.0 3,162,247 + +0.3 3,162,416 - +0.4
Or see this region's nucleotide sequence