Strain Fitness in Marinobacter adhaerens HP15 around HP15_3003
Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Aluminum chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
3,147,074 | + | HP15_3002 | 0.57 | +0.2 | |
3,147,219 | + | HP15_3002 | 0.65 | +0.6 | |
3,147,264 | - | HP15_3002 | 0.67 | -0.1 | |
3,147,493 | + | HP15_3002 | 0.78 | +0.6 | |
3,147,517 | + | HP15_3002 | 0.79 | +0.3 | |
3,147,609 | + | HP15_3002 | 0.84 | +0.9 | |
3,148,196 | + | HP15_3003 | 0.24 | +0.6 | |
3,148,289 | + | HP15_3003 | 0.43 | +2.9 | |
3,148,331 | + | HP15_3003 | 0.51 | +2.3 | |
3,148,388 | - | HP15_3003 | 0.62 | +1.4 | |
3,148,388 | - | HP15_3003 | 0.62 | +0.9 | |
3,148,395 | + | HP15_3003 | 0.64 | +0.9 | |
3,148,470 | + | HP15_3003 | 0.79 | +1.3 | |
3,148,487 | + | HP15_3003 | 0.82 | +0.5 | |
3,148,609 | + | +1.2 | |||
3,148,628 | + | +0.6 | |||
3,148,634 | - | +0.5 | |||
3,148,641 | - | +1.0 | |||
3,148,877 | - | HP15_3004 | 0.37 | -1.7 | |
3,148,910 | + | HP15_3004 | 0.45 | -1.0 | |
3,148,910 | + | HP15_3004 | 0.45 | -3.8 | |
3,149,139 | + | -1.7 | |||
3,149,167 | + | -0.9 | |||
3,149,167 | + | +0.0 |
Or see this region's nucleotide sequence