Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2776 and HP15_2777 are separated by 110 nucleotides HP15_2777 and HP15_2778 are separated by 24 nucleotides HP15_2778 and HP15_2779 are separated by 40 nucleotides
HP15_2776: HP15_2776 - membrane protein containing DUF6, transmembrane, at 2,928,482 to 2,929,384
_2776
HP15_2777: HP15_2777 - penicillin-binding protein 1B, at 2,929,495 to 2,929,707
_2777
HP15_2778: HP15_2778 - transcriptional regulator, at 2,929,732 to 2,930,400
_2778
HP15_2779: HP15_2779 - GTP cyclohydrolase II, at 2,930,441 to 2,930,920
_2779
Position (kb)
2929
2930 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2928.508 kb on - strand at 2928.567 kb on + strand at 2928.567 kb on + strand at 2928.631 kb on - strand, within HP15_2776 at 2928.636 kb on - strand, within HP15_2776 at 2928.679 kb on + strand, within HP15_2776 at 2928.759 kb on + strand, within HP15_2776 at 2928.759 kb on + strand, within HP15_2776 at 2928.813 kb on + strand, within HP15_2776 at 2928.813 kb on + strand, within HP15_2776 at 2928.816 kb on + strand, within HP15_2776 at 2928.820 kb on - strand, within HP15_2776 at 2928.820 kb on - strand, within HP15_2776 at 2928.831 kb on + strand, within HP15_2776 at 2928.999 kb on - strand, within HP15_2776 at 2929.058 kb on - strand, within HP15_2776 at 2929.127 kb on - strand, within HP15_2776 at 2929.152 kb on + strand, within HP15_2776 at 2929.232 kb on - strand, within HP15_2776 at 2929.422 kb on - strand at 2929.422 kb on - strand at 2929.422 kb on - strand at 2929.422 kb on - strand at 2929.477 kb on + strand at 2929.477 kb on + strand at 2929.477 kb on + strand at 2929.485 kb on - strand at 2929.485 kb on - strand at 2929.651 kb on - strand, within HP15_2777 at 2929.743 kb on - strand at 2929.799 kb on + strand, within HP15_2778 at 2929.871 kb on - strand, within HP15_2778 at 2929.886 kb on - strand, within HP15_2778 at 2929.903 kb on - strand, within HP15_2778 at 2930.088 kb on - strand, within HP15_2778 at 2930.115 kb on - strand, within HP15_2778 at 2930.202 kb on + strand, within HP15_2778 at 2930.208 kb on + strand, within HP15_2778 at 2930.210 kb on - strand, within HP15_2778 at 2930.265 kb on + strand, within HP15_2778 at 2930.267 kb on - strand, within HP15_2778 at 2930.305 kb on + strand, within HP15_2778 at 2930.402 kb on - strand at 2930.413 kb on + strand at 2930.494 kb on - strand, within HP15_2779 at 2930.588 kb on + strand, within HP15_2779 at 2930.603 kb on - strand, within HP15_2779 at 2930.652 kb on + strand, within HP15_2779 at 2930.662 kb on + strand, within HP15_2779 at 2930.687 kb on + strand, within HP15_2779
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,928,508 - -0.1 2,928,567 + +3.0 2,928,567 + +0.5 2,928,631 - HP15_2776 0.17 -0.0 2,928,636 - HP15_2776 0.17 -0.1 2,928,679 + HP15_2776 0.22 +0.9 2,928,759 + HP15_2776 0.31 +0.9 2,928,759 + HP15_2776 0.31 -0.4 2,928,813 + HP15_2776 0.37 -0.7 2,928,813 + HP15_2776 0.37 +0.1 2,928,816 + HP15_2776 0.37 +0.5 2,928,820 - HP15_2776 0.37 -0.3 2,928,820 - HP15_2776 0.37 -0.2 2,928,831 + HP15_2776 0.39 +0.2 2,928,999 - HP15_2776 0.57 +0.7 2,929,058 - HP15_2776 0.64 +1.0 2,929,127 - HP15_2776 0.71 +0.2 2,929,152 + HP15_2776 0.74 +1.7 2,929,232 - HP15_2776 0.83 +0.1 2,929,422 - +0.1 2,929,422 - -0.1 2,929,422 - +0.9 2,929,422 - +0.1 2,929,477 + -0.1 2,929,477 + +0.6 2,929,477 + +1.9 2,929,485 - -0.1 2,929,485 - -0.1 2,929,651 - HP15_2777 0.73 +0.7 2,929,743 - -0.4 2,929,799 + HP15_2778 0.10 +0.6 2,929,871 - HP15_2778 0.21 -0.2 2,929,886 - HP15_2778 0.23 -0.1 2,929,903 - HP15_2778 0.26 +0.2 2,930,088 - HP15_2778 0.53 -0.0 2,930,115 - HP15_2778 0.57 +0.4 2,930,202 + HP15_2778 0.70 +0.3 2,930,208 + HP15_2778 0.71 -0.0 2,930,210 - HP15_2778 0.71 +0.1 2,930,265 + HP15_2778 0.80 -0.8 2,930,267 - HP15_2778 0.80 +0.9 2,930,305 + HP15_2778 0.86 -0.1 2,930,402 - +1.0 2,930,413 + -0.1 2,930,494 - HP15_2779 0.11 +0.2 2,930,588 + HP15_2779 0.31 -0.6 2,930,603 - HP15_2779 0.34 +0.3 2,930,652 + HP15_2779 0.44 +0.8 2,930,662 + HP15_2779 0.46 +0.1 2,930,687 + HP15_2779 0.51 +0.1
Or see this region's nucleotide sequence