Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2696 and HP15_2697 are separated by 327 nucleotides HP15_2697 and HP15_2698 are separated by 17 nucleotides HP15_2698 and HP15_2699 are separated by 12 nucleotides
HP15_2696: HP15_2696 - phenylacetate-CoA ligase, at 2,848,384 to 2,849,694
_2696
HP15_2697: HP15_2697 - phenylacetate-CoA oxygenase, PaaG subunit, at 2,850,022 to 2,851,014
_2697
HP15_2698: HP15_2698 - phenylacetate-CoA oxygenase, PaaH subunit, at 2,851,032 to 2,851,313
_2698
HP15_2699: HP15_2699 - phenylacetate-CoA oxygenase, PaaI subunit, at 2,851,326 to 2,852,090
_2699
Position (kb)
2850
2851
2852 Strain fitness (log2 ratio)
-1
0
1
2 at 2849.046 kb on + strand, within HP15_2696 at 2849.100 kb on + strand, within HP15_2696 at 2849.134 kb on - strand, within HP15_2696 at 2849.254 kb on + strand, within HP15_2696 at 2849.256 kb on - strand, within HP15_2696 at 2849.303 kb on + strand, within HP15_2696 at 2849.311 kb on - strand, within HP15_2696 at 2849.491 kb on + strand, within HP15_2696 at 2849.545 kb on + strand, within HP15_2696 at 2849.616 kb on + strand at 2849.634 kb on - strand at 2849.689 kb on - strand at 2849.716 kb on - strand at 2849.814 kb on - strand at 2849.976 kb on + strand at 2849.985 kb on + strand at 2849.993 kb on - strand at 2850.001 kb on - strand at 2850.065 kb on + strand at 2850.180 kb on + strand, within HP15_2697 at 2850.241 kb on - strand, within HP15_2697 at 2850.305 kb on + strand, within HP15_2697 at 2850.323 kb on - strand, within HP15_2697 at 2850.923 kb on - strand at 2850.967 kb on + strand at 2851.100 kb on - strand, within HP15_2698 at 2851.178 kb on - strand, within HP15_2698 at 2851.307 kb on + strand at 2851.315 kb on - strand at 2851.315 kb on - strand at 2851.356 kb on + strand at 2851.453 kb on + strand, within HP15_2699 at 2851.592 kb on + strand, within HP15_2699 at 2851.939 kb on - strand, within HP15_2699 at 2851.959 kb on - strand, within HP15_2699 at 2851.988 kb on + strand, within HP15_2699
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,849,046 + HP15_2696 0.50 +1.1 2,849,100 + HP15_2696 0.55 +0.5 2,849,134 - HP15_2696 0.57 -0.2 2,849,254 + HP15_2696 0.66 +0.1 2,849,256 - HP15_2696 0.67 +0.0 2,849,303 + HP15_2696 0.70 +0.0 2,849,311 - HP15_2696 0.71 +0.4 2,849,491 + HP15_2696 0.84 +1.4 2,849,545 + HP15_2696 0.89 -0.1 2,849,616 + +0.4 2,849,634 - +0.3 2,849,689 - -0.5 2,849,716 - -0.4 2,849,814 - +0.4 2,849,976 + +0.2 2,849,985 + +0.2 2,849,993 - +0.2 2,850,001 - +0.4 2,850,065 + +0.2 2,850,180 + HP15_2697 0.16 +0.4 2,850,241 - HP15_2697 0.22 +0.1 2,850,305 + HP15_2697 0.28 +0.4 2,850,323 - HP15_2697 0.30 +1.1 2,850,923 - +1.0 2,850,967 + +0.2 2,851,100 - HP15_2698 0.24 -1.1 2,851,178 - HP15_2698 0.52 -0.1 2,851,307 + -0.7 2,851,315 - +1.5 2,851,315 - -0.3 2,851,356 + +1.8 2,851,453 + HP15_2699 0.17 +1.4 2,851,592 + HP15_2699 0.35 -1.3 2,851,939 - HP15_2699 0.80 +0.4 2,851,959 - HP15_2699 0.83 +0.5 2,851,988 + HP15_2699 0.87 +0.1
Or see this region's nucleotide sequence