Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2685 and HP15_2686 overlap by 4 nucleotides HP15_2686 and HP15_2687 overlap by 11 nucleotides HP15_2687 and HP15_2688 are separated by 38 nucleotides
HP15_2685: HP15_2685 - UPF0271 protein, LamB/YcsF family, at 2,833,010 to 2,833,744
_2685
HP15_2686: HP15_2686 - allophanate hydrolase subunit 1, at 2,833,741 to 2,834,433
_2686
HP15_2687: HP15_2687 - urea amidolyase related protein, at 2,834,423 to 2,835,361
_2687
HP15_2688: HP15_2688 - L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) , at 2,835,400 to 2,839,029
_2688
Position (kb)
2834
2835
2836 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2833.489 kb on + strand, within HP15_2685 at 2833.584 kb on + strand, within HP15_2685 at 2833.652 kb on - strand, within HP15_2685 at 2833.889 kb on + strand, within HP15_2686 at 2833.889 kb on + strand, within HP15_2686 at 2833.894 kb on + strand, within HP15_2686 at 2833.940 kb on + strand, within HP15_2686 at 2834.049 kb on - strand, within HP15_2686 at 2834.124 kb on + strand, within HP15_2686 at 2834.176 kb on - strand, within HP15_2686 at 2834.355 kb on + strand, within HP15_2686 at 2834.526 kb on + strand, within HP15_2687 at 2834.601 kb on + strand, within HP15_2687 at 2834.713 kb on + strand, within HP15_2687 at 2834.778 kb on + strand, within HP15_2687 at 2834.877 kb on - strand, within HP15_2687 at 2835.309 kb on + strand at 2835.351 kb on + strand at 2835.359 kb on - strand at 2835.459 kb on + strand at 2835.467 kb on - strand at 2835.491 kb on - strand at 2835.559 kb on - strand at 2835.677 kb on + strand at 2835.713 kb on - strand at 2835.734 kb on + strand at 2835.814 kb on + strand, within HP15_2688 at 2835.921 kb on + strand, within HP15_2688 at 2836.071 kb on + strand, within HP15_2688 at 2836.132 kb on + strand, within HP15_2688 at 2836.229 kb on - strand, within HP15_2688 at 2836.281 kb on - strand, within HP15_2688 at 2836.316 kb on - strand, within HP15_2688 at 2836.316 kb on - strand, within HP15_2688
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,833,489 + HP15_2685 0.65 +0.7 2,833,584 + HP15_2685 0.78 +1.3 2,833,652 - HP15_2685 0.87 +2.3 2,833,889 + HP15_2686 0.21 +0.9 2,833,889 + HP15_2686 0.21 -0.4 2,833,894 + HP15_2686 0.22 +0.9 2,833,940 + HP15_2686 0.29 +1.6 2,834,049 - HP15_2686 0.44 +0.2 2,834,124 + HP15_2686 0.55 +1.3 2,834,176 - HP15_2686 0.63 +0.1 2,834,355 + HP15_2686 0.89 +2.8 2,834,526 + HP15_2687 0.11 +0.9 2,834,601 + HP15_2687 0.19 +0.1 2,834,713 + HP15_2687 0.31 +1.0 2,834,778 + HP15_2687 0.38 +0.5 2,834,877 - HP15_2687 0.48 +1.7 2,835,309 + +2.0 2,835,351 + -0.8 2,835,359 - -0.9 2,835,459 + -0.6 2,835,467 - -1.1 2,835,491 - +0.2 2,835,559 - -0.1 2,835,677 + -0.8 2,835,713 - +0.6 2,835,734 + -2.1 2,835,814 + HP15_2688 0.11 -0.4 2,835,921 + HP15_2688 0.14 +0.3 2,836,071 + HP15_2688 0.18 +0.2 2,836,132 + HP15_2688 0.20 -0.0 2,836,229 - HP15_2688 0.23 +0.6 2,836,281 - HP15_2688 0.24 +1.3 2,836,316 - HP15_2688 0.25 -0.2 2,836,316 - HP15_2688 0.25 -1.1
Or see this region's nucleotide sequence