Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2587 and HP15_2588 are separated by 41 nucleotides HP15_2588 and HP15_2589 are separated by 34 nucleotides HP15_2589 and HP15_2590 overlap by 4 nucleotides
HP15_2587: HP15_2587 - monovalent cation/H+ antiporter subunit A, at 2,736,626 to 2,738,935
_2587
HP15_2588: HP15_2588 - Na+/H+ antiporter MnhB subunit-related protein, at 2,738,977 to 2,739,357
_2588
HP15_2589: HP15_2589 - NADH:ubiquinone/quinone oxidoreductase, chain 4L, at 2,739,392 to 2,739,739
_2589
HP15_2590: HP15_2590 - monovalent cation/H+ antiporter subunit D, at 2,739,736 to 2,741,250
_2590
Position (kb)
2739
2740 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2738.528 kb on - strand, within HP15_2587 at 2738.590 kb on + strand, within HP15_2587 at 2738.600 kb on - strand, within HP15_2587 at 2738.744 kb on - strand at 2738.781 kb on + strand at 2738.786 kb on + strand at 2738.794 kb on - strand at 2738.847 kb on - strand at 2738.867 kb on - strand at 2738.915 kb on + strand at 2739.050 kb on + strand, within HP15_2588 at 2739.076 kb on - strand, within HP15_2588 at 2739.207 kb on - strand, within HP15_2588 at 2739.207 kb on - strand, within HP15_2588 at 2739.232 kb on + strand, within HP15_2588 at 2739.254 kb on + strand, within HP15_2588 at 2739.302 kb on - strand, within HP15_2588 at 2739.316 kb on + strand, within HP15_2588 at 2739.406 kb on + strand at 2739.422 kb on - strand at 2739.499 kb on - strand, within HP15_2589 at 2739.615 kb on + strand, within HP15_2589 at 2739.676 kb on - strand, within HP15_2589 at 2739.699 kb on + strand, within HP15_2589 at 2739.792 kb on - strand at 2739.921 kb on + strand, within HP15_2590 at 2739.942 kb on - strand, within HP15_2590 at 2739.944 kb on - strand, within HP15_2590 at 2739.946 kb on + strand, within HP15_2590 at 2739.980 kb on - strand, within HP15_2590 at 2740.028 kb on + strand, within HP15_2590 at 2740.262 kb on + strand, within HP15_2590 at 2740.280 kb on - strand, within HP15_2590 at 2740.318 kb on + strand, within HP15_2590 at 2740.328 kb on + strand, within HP15_2590 at 2740.338 kb on - strand, within HP15_2590 at 2740.346 kb on - strand, within HP15_2590 at 2740.484 kb on + strand, within HP15_2590 at 2740.484 kb on + strand, within HP15_2590 at 2740.499 kb on - strand, within HP15_2590 at 2740.529 kb on - strand, within HP15_2590 at 2740.561 kb on - strand, within HP15_2590 at 2740.563 kb on - strand, within HP15_2590 at 2740.563 kb on - strand, within HP15_2590 at 2740.563 kb on - strand, within HP15_2590 at 2740.671 kb on + strand, within HP15_2590
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,738,528 - HP15_2587 0.82 +0.6 2,738,590 + HP15_2587 0.85 -1.3 2,738,600 - HP15_2587 0.85 +0.5 2,738,744 - -0.7 2,738,781 + -0.1 2,738,786 + -0.9 2,738,794 - -0.6 2,738,847 - -0.3 2,738,867 - -0.5 2,738,915 + -0.2 2,739,050 + HP15_2588 0.19 -0.3 2,739,076 - HP15_2588 0.26 +1.0 2,739,207 - HP15_2588 0.60 -0.2 2,739,207 - HP15_2588 0.60 -0.3 2,739,232 + HP15_2588 0.67 -0.1 2,739,254 + HP15_2588 0.73 +4.0 2,739,302 - HP15_2588 0.85 -0.0 2,739,316 + HP15_2588 0.89 -0.2 2,739,406 + +0.2 2,739,422 - +0.0 2,739,499 - HP15_2589 0.31 +0.7 2,739,615 + HP15_2589 0.64 +0.1 2,739,676 - HP15_2589 0.82 +0.8 2,739,699 + HP15_2589 0.88 +0.2 2,739,792 - -0.2 2,739,921 + HP15_2590 0.12 +0.3 2,739,942 - HP15_2590 0.14 -0.3 2,739,944 - HP15_2590 0.14 -0.0 2,739,946 + HP15_2590 0.14 -0.8 2,739,980 - HP15_2590 0.16 -0.4 2,740,028 + HP15_2590 0.19 -0.7 2,740,262 + HP15_2590 0.35 +0.2 2,740,280 - HP15_2590 0.36 +0.7 2,740,318 + HP15_2590 0.38 +0.3 2,740,328 + HP15_2590 0.39 -1.2 2,740,338 - HP15_2590 0.40 -0.6 2,740,346 - HP15_2590 0.40 -1.4 2,740,484 + HP15_2590 0.49 +1.1 2,740,484 + HP15_2590 0.49 -0.1 2,740,499 - HP15_2590 0.50 -0.5 2,740,529 - HP15_2590 0.52 +0.4 2,740,561 - HP15_2590 0.54 -0.5 2,740,563 - HP15_2590 0.55 -0.3 2,740,563 - HP15_2590 0.55 +0.3 2,740,563 - HP15_2590 0.55 -0.2 2,740,671 + HP15_2590 0.62 -0.6
Or see this region's nucleotide sequence