Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2546 and HP15_2547 are separated by 202 nucleotides HP15_2547 and HP15_2548 are separated by 151 nucleotides HP15_2548 and HP15_2549 are separated by 30 nucleotides HP15_2549 and HP15_2550 are separated by 23 nucleotides
HP15_2546: HP15_2546 - BLUF domain protein, at 2,692,973 to 2,693,530
_2546
HP15_2547: HP15_2547 - membrane protein containing uncharacterized protein family UPF0126 domains, at 2,693,733 to 2,694,350
_2547
HP15_2548: HP15_2548 - xanthine/uracil permease family protein, at 2,694,502 to 2,695,800
_2548
HP15_2549: HP15_2549 - adenine phosphoribosyltransferase, at 2,695,831 to 2,696,373
_2549
HP15_2550: HP15_2550 - fumarylacetoacetate hydrolase family protein, at 2,696,397 to 2,697,059
_2550
Position (kb)
2694
2695
2696 Strain fitness (log2 ratio)
-1
0
1
2 at 2693.527 kb on - strand at 2693.544 kb on + strand at 2693.628 kb on + strand at 2693.708 kb on + strand at 2693.866 kb on + strand, within HP15_2547 at 2693.866 kb on + strand, within HP15_2547 at 2693.996 kb on + strand, within HP15_2547 at 2694.185 kb on - strand, within HP15_2547 at 2694.359 kb on - strand at 2694.492 kb on + strand at 2694.534 kb on + strand at 2694.686 kb on - strand, within HP15_2548 at 2694.789 kb on - strand, within HP15_2548 at 2694.811 kb on + strand, within HP15_2548 at 2694.819 kb on - strand, within HP15_2548 at 2694.848 kb on + strand, within HP15_2548 at 2694.856 kb on - strand, within HP15_2548 at 2694.856 kb on - strand, within HP15_2548 at 2694.927 kb on - strand, within HP15_2548 at 2695.171 kb on + strand, within HP15_2548 at 2695.257 kb on + strand, within HP15_2548 at 2695.265 kb on - strand, within HP15_2548 at 2695.291 kb on - strand, within HP15_2548 at 2695.389 kb on - strand, within HP15_2548 at 2695.514 kb on + strand, within HP15_2548 at 2695.585 kb on - strand, within HP15_2548 at 2695.699 kb on + strand at 2695.724 kb on + strand at 2695.873 kb on + strand at 2695.873 kb on + strand at 2695.873 kb on + strand at 2695.873 kb on + strand at 2695.873 kb on + strand at 2695.873 kb on + strand at 2695.881 kb on - strand at 2695.881 kb on - strand at 2695.881 kb on - strand at 2695.883 kb on + strand at 2695.891 kb on - strand, within HP15_2549 at 2695.929 kb on + strand, within HP15_2549 at 2696.038 kb on + strand, within HP15_2549 at 2696.046 kb on - strand, within HP15_2549 at 2696.046 kb on - strand, within HP15_2549 at 2696.046 kb on - strand, within HP15_2549 at 2696.053 kb on - strand, within HP15_2549 at 2696.076 kb on - strand, within HP15_2549 at 2696.152 kb on - strand, within HP15_2549 at 2696.348 kb on - strand at 2696.348 kb on - strand at 2696.499 kb on - strand, within HP15_2550 at 2696.499 kb on - strand, within HP15_2550 at 2696.640 kb on + strand, within HP15_2550 at 2696.684 kb on + strand, within HP15_2550 at 2696.769 kb on - strand, within HP15_2550
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,693,527 - +0.2 2,693,544 + -0.5 2,693,628 + +0.2 2,693,708 + -0.1 2,693,866 + HP15_2547 0.22 +0.0 2,693,866 + HP15_2547 0.22 -0.2 2,693,996 + HP15_2547 0.43 -0.4 2,694,185 - HP15_2547 0.73 +0.1 2,694,359 - +0.2 2,694,492 + +0.9 2,694,534 + +0.6 2,694,686 - HP15_2548 0.14 +0.2 2,694,789 - HP15_2548 0.22 +0.3 2,694,811 + HP15_2548 0.24 -0.0 2,694,819 - HP15_2548 0.24 -0.2 2,694,848 + HP15_2548 0.27 +0.1 2,694,856 - HP15_2548 0.27 +1.5 2,694,856 - HP15_2548 0.27 +0.8 2,694,927 - HP15_2548 0.33 +0.8 2,695,171 + HP15_2548 0.52 +1.3 2,695,257 + HP15_2548 0.58 +0.2 2,695,265 - HP15_2548 0.59 +0.5 2,695,291 - HP15_2548 0.61 +1.2 2,695,389 - HP15_2548 0.68 +0.9 2,695,514 + HP15_2548 0.78 +0.5 2,695,585 - HP15_2548 0.83 +0.6 2,695,699 + +0.6 2,695,724 + +0.6 2,695,873 + -0.6 2,695,873 + +0.3 2,695,873 + +1.1 2,695,873 + +1.1 2,695,873 + +0.9 2,695,873 + +1.6 2,695,881 - +0.2 2,695,881 - +0.7 2,695,881 - -1.5 2,695,883 + +0.4 2,695,891 - HP15_2549 0.11 +1.3 2,695,929 + HP15_2549 0.18 +1.8 2,696,038 + HP15_2549 0.38 +0.4 2,696,046 - HP15_2549 0.40 -0.3 2,696,046 - HP15_2549 0.40 +0.2 2,696,046 - HP15_2549 0.40 -0.3 2,696,053 - HP15_2549 0.41 +0.3 2,696,076 - HP15_2549 0.45 -0.2 2,696,152 - HP15_2549 0.59 +0.4 2,696,348 - -0.8 2,696,348 - +0.3 2,696,499 - HP15_2550 0.15 -0.2 2,696,499 - HP15_2550 0.15 +0.0 2,696,640 + HP15_2550 0.37 -0.3 2,696,684 + HP15_2550 0.43 -0.5 2,696,769 - HP15_2550 0.56 +0.6
Or see this region's nucleotide sequence