Strain Fitness in Marinobacter adhaerens HP15 around HP15_2433

Experiment: m.b. Aluminum chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2430 and HP15_2431 are separated by 28 nucleotidesHP15_2431 and HP15_2432 are separated by 104 nucleotidesHP15_2432 and HP15_2433 overlap by 4 nucleotidesHP15_2433 and HP15_2434 overlap by 4 nucleotidesHP15_2434 and HP15_2435 are separated by 34 nucleotides HP15_2430: HP15_2430 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 2,571,451 to 2,572,713 _2430 HP15_2431: HP15_2431 - transcriptional regulator, BolA superfamily protein, at 2,572,742 to 2,572,984 _2431 HP15_2432: HP15_2432 - NTP binding protein (contains STAS domain), at 2,573,089 to 2,573,421 _2432 HP15_2433: HP15_2433 - toluene tolerance family protein, at 2,573,418 to 2,574,107 _2433 HP15_2434: HP15_2434 - mammalian cell entry related domain protein, at 2,574,104 to 2,574,553 _2434 HP15_2435: HP15_2435 - ABC-type transport system involved in resistance to organic solvents, permease component, at 2,574,588 to 2,575,370 _2435 Position (kb) 2573 2574 2575Strain fitness (log2 ratio) -1 0 1 2at 2573.056 kb on - strandat 2573.247 kb on + strand, within HP15_2432at 2573.247 kb on + strand, within HP15_2432at 2573.247 kb on + strand, within HP15_2432at 2573.262 kb on - strand, within HP15_2432at 2573.452 kb on - strandat 2573.601 kb on + strand, within HP15_2433at 2573.607 kb on - strand, within HP15_2433at 2573.607 kb on - strand, within HP15_2433at 2574.157 kb on - strand, within HP15_2434at 2574.179 kb on - strand, within HP15_2434at 2574.238 kb on + strand, within HP15_2434at 2574.256 kb on - strand, within HP15_2434at 2574.274 kb on - strand, within HP15_2434at 2574.361 kb on + strand, within HP15_2434at 2574.369 kb on - strand, within HP15_2434at 2574.369 kb on - strand, within HP15_2434at 2574.560 kb on - strandat 2574.617 kb on + strandat 2574.705 kb on + strand, within HP15_2435at 2574.713 kb on - strand, within HP15_2435at 2574.732 kb on + strand, within HP15_2435at 2574.771 kb on + strand, within HP15_2435at 2574.803 kb on + strand, within HP15_2435at 2574.836 kb on + strand, within HP15_2435at 2574.853 kb on + strand, within HP15_2435at 2575.104 kb on + strand, within HP15_2435

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM
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2,573,056 - -0.5
2,573,247 + HP15_2432 0.47 +0.2
2,573,247 + HP15_2432 0.47 +0.2
2,573,247 + HP15_2432 0.47 -0.6
2,573,262 - HP15_2432 0.52 +2.4
2,573,452 - +1.1
2,573,601 + HP15_2433 0.27 +1.1
2,573,607 - HP15_2433 0.27 +1.4
2,573,607 - HP15_2433 0.27 +1.2
2,574,157 - HP15_2434 0.12 -0.1
2,574,179 - HP15_2434 0.17 -0.3
2,574,238 + HP15_2434 0.30 +1.1
2,574,256 - HP15_2434 0.34 -0.8
2,574,274 - HP15_2434 0.38 -0.8
2,574,361 + HP15_2434 0.57 +0.8
2,574,369 - HP15_2434 0.59 -0.3
2,574,369 - HP15_2434 0.59 -0.9
2,574,560 - -0.4
2,574,617 + -0.0
2,574,705 + HP15_2435 0.15 -0.1
2,574,713 - HP15_2435 0.16 -1.3
2,574,732 + HP15_2435 0.18 -0.0
2,574,771 + HP15_2435 0.23 -0.4
2,574,803 + HP15_2435 0.27 +0.1
2,574,836 + HP15_2435 0.32 -0.5
2,574,853 + HP15_2435 0.34 +0.3
2,575,104 + HP15_2435 0.66 -0.2

Or see this region's nucleotide sequence