Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2409 and HP15_2410 are separated by 2 nucleotides HP15_2410 and HP15_2411 are separated by 0 nucleotides HP15_2411 and HP15_2412 are separated by 3 nucleotides
HP15_2409: HP15_2409 - ATPase, type IV, pilus assembly, PilB, at 2,543,581 to 2,545,296
_2409
HP15_2410: HP15_2410 - type IV pilus biogenesis protein PilC, at 2,545,299 to 2,546,519
_2410
HP15_2411: HP15_2411 - type IV pilus prepilin peptidase PilD, at 2,546,520 to 2,547,395
_2411
HP15_2412: HP15_2412 - dephospho-CoA kinase, at 2,547,399 to 2,547,998
_2412
Position (kb)
2545
2546
2547 Strain fitness (log2 ratio)
-1
0
1 at 2544.338 kb on - strand, within HP15_2409 at 2544.345 kb on + strand, within HP15_2409 at 2544.355 kb on - strand, within HP15_2409 at 2544.357 kb on + strand, within HP15_2409 at 2544.424 kb on + strand, within HP15_2409 at 2544.543 kb on + strand, within HP15_2409 at 2544.610 kb on - strand, within HP15_2409 at 2544.616 kb on + strand, within HP15_2409 at 2544.618 kb on + strand, within HP15_2409 at 2544.658 kb on - strand, within HP15_2409 at 2544.673 kb on - strand, within HP15_2409 at 2544.756 kb on - strand, within HP15_2409 at 2544.841 kb on - strand, within HP15_2409 at 2544.850 kb on + strand, within HP15_2409 at 2544.853 kb on - strand, within HP15_2409 at 2544.956 kb on - strand, within HP15_2409 at 2544.971 kb on - strand, within HP15_2409 at 2545.072 kb on - strand, within HP15_2409 at 2545.072 kb on - strand, within HP15_2409 at 2545.098 kb on - strand, within HP15_2409 at 2545.290 kb on + strand at 2545.298 kb on - strand at 2545.298 kb on - strand at 2545.298 kb on - strand at 2545.298 kb on - strand at 2545.390 kb on + strand at 2545.431 kb on + strand, within HP15_2410 at 2545.540 kb on - strand, within HP15_2410 at 2545.540 kb on - strand, within HP15_2410 at 2545.702 kb on - strand, within HP15_2410 at 2545.753 kb on + strand, within HP15_2410 at 2545.790 kb on + strand, within HP15_2410 at 2545.938 kb on + strand, within HP15_2410 at 2546.027 kb on + strand, within HP15_2410 at 2546.050 kb on - strand, within HP15_2410 at 2546.216 kb on - strand, within HP15_2410 at 2546.239 kb on - strand, within HP15_2410 at 2546.262 kb on - strand, within HP15_2410 at 2546.417 kb on - strand at 2546.442 kb on + strand at 2546.645 kb on + strand, within HP15_2411 at 2546.815 kb on - strand, within HP15_2411 at 2546.837 kb on - strand, within HP15_2411 at 2546.939 kb on + strand, within HP15_2411 at 2547.006 kb on - strand, within HP15_2411 at 2547.006 kb on - strand, within HP15_2411 at 2547.014 kb on + strand, within HP15_2411 at 2547.025 kb on + strand, within HP15_2411 at 2547.084 kb on - strand, within HP15_2411 at 2547.270 kb on - strand, within HP15_2411 at 2547.294 kb on - strand, within HP15_2411 at 2547.333 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,544,338 - HP15_2409 0.44 -0.3 2,544,345 + HP15_2409 0.45 -0.1 2,544,355 - HP15_2409 0.45 +0.1 2,544,357 + HP15_2409 0.45 +0.2 2,544,424 + HP15_2409 0.49 -0.0 2,544,543 + HP15_2409 0.56 -0.5 2,544,610 - HP15_2409 0.60 -0.1 2,544,616 + HP15_2409 0.60 -0.0 2,544,618 + HP15_2409 0.60 +0.5 2,544,658 - HP15_2409 0.63 +0.2 2,544,673 - HP15_2409 0.64 +0.7 2,544,756 - HP15_2409 0.68 +0.3 2,544,841 - HP15_2409 0.73 +0.7 2,544,850 + HP15_2409 0.74 -0.3 2,544,853 - HP15_2409 0.74 +0.9 2,544,956 - HP15_2409 0.80 +0.7 2,544,971 - HP15_2409 0.81 +0.5 2,545,072 - HP15_2409 0.87 +0.2 2,545,072 - HP15_2409 0.87 +0.7 2,545,098 - HP15_2409 0.88 +0.2 2,545,290 + +1.0 2,545,298 - +0.7 2,545,298 - +1.1 2,545,298 - +0.9 2,545,298 - +0.7 2,545,390 + -0.4 2,545,431 + HP15_2410 0.11 -0.4 2,545,540 - HP15_2410 0.20 +1.3 2,545,540 - HP15_2410 0.20 +0.8 2,545,702 - HP15_2410 0.33 +0.8 2,545,753 + HP15_2410 0.37 +0.7 2,545,790 + HP15_2410 0.40 +0.9 2,545,938 + HP15_2410 0.52 -0.3 2,546,027 + HP15_2410 0.60 -0.0 2,546,050 - HP15_2410 0.62 +0.8 2,546,216 - HP15_2410 0.75 +0.3 2,546,239 - HP15_2410 0.77 +0.4 2,546,262 - HP15_2410 0.79 +1.2 2,546,417 - +1.1 2,546,442 + +1.2 2,546,645 + HP15_2411 0.14 +0.5 2,546,815 - HP15_2411 0.34 +0.6 2,546,837 - HP15_2411 0.36 +1.3 2,546,939 + HP15_2411 0.48 +0.6 2,547,006 - HP15_2411 0.55 +0.0 2,547,006 - HP15_2411 0.55 +1.1 2,547,014 + HP15_2411 0.56 +0.2 2,547,025 + HP15_2411 0.58 +1.7 2,547,084 - HP15_2411 0.64 +1.4 2,547,270 - HP15_2411 0.86 +1.5 2,547,294 - HP15_2411 0.88 +0.2 2,547,333 - +1.4
Or see this region's nucleotide sequence