Strain Fitness in Marinobacter adhaerens HP15 around HP15_2307

Experiment: m.b. Aluminum chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2305 and HP15_2306 are separated by 158 nucleotidesHP15_2306 and HP15_2307 are separated by 2 nucleotidesHP15_2307 and HP15_2308 overlap by 20 nucleotides HP15_2305: HP15_2305 - flagellar biosynthesis protein A, at 2,426,023 to 2,428,263 _2305 HP15_2306: HP15_2306 - uracil phosphoribosyltransferase, at 2,428,422 to 2,429,060 _2306 HP15_2307: HP15_2307 - xanthine/uracil permease, at 2,429,063 to 2,430,319 _2307 HP15_2308: HP15_2308 - O-methyltransferase, at 2,430,300 to 2,431,154 _2308 Position (kb) 2429 2430 2431Strain fitness (log2 ratio) -1 0 1 2at 2428.064 kb on - strandat 2428.418 kb on + strandat 2428.426 kb on - strandat 2428.445 kb on - strandat 2428.533 kb on + strand, within HP15_2306at 2428.533 kb on + strand, within HP15_2306at 2428.591 kb on + strand, within HP15_2306at 2428.599 kb on - strand, within HP15_2306at 2428.619 kb on - strand, within HP15_2306at 2428.688 kb on - strand, within HP15_2306at 2428.966 kb on + strand, within HP15_2306at 2428.966 kb on + strand, within HP15_2306at 2429.188 kb on + strandat 2429.222 kb on - strand, within HP15_2307at 2429.374 kb on - strand, within HP15_2307at 2429.448 kb on + strand, within HP15_2307at 2429.480 kb on + strand, within HP15_2307at 2429.527 kb on - strand, within HP15_2307at 2429.763 kb on + strand, within HP15_2307at 2429.771 kb on - strand, within HP15_2307at 2429.776 kb on - strand, within HP15_2307at 2429.922 kb on + strand, within HP15_2307at 2429.965 kb on + strand, within HP15_2307at 2429.973 kb on - strand, within HP15_2307at 2430.002 kb on + strand, within HP15_2307at 2430.017 kb on + strand, within HP15_2307at 2430.040 kb on - strand, within HP15_2307at 2430.090 kb on - strand, within HP15_2307at 2430.175 kb on - strand, within HP15_2307at 2430.249 kb on + strandat 2430.286 kb on + strandat 2430.286 kb on + strandat 2430.344 kb on + strandat 2430.355 kb on - strandat 2430.396 kb on - strand, within HP15_2308at 2430.707 kb on + strand, within HP15_2308at 2430.715 kb on - strand, within HP15_2308at 2430.933 kb on + strand, within HP15_2308at 2430.954 kb on - strand, within HP15_2308at 2430.956 kb on + strand, within HP15_2308at 2430.964 kb on - strand, within HP15_2308at 2431.261 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM
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2,428,064 - -0.4
2,428,418 + +1.1
2,428,426 - +0.1
2,428,445 - +0.9
2,428,533 + HP15_2306 0.17 +1.0
2,428,533 + HP15_2306 0.17 -0.3
2,428,591 + HP15_2306 0.26 +0.6
2,428,599 - HP15_2306 0.28 +0.6
2,428,619 - HP15_2306 0.31 -0.1
2,428,688 - HP15_2306 0.42 -0.5
2,428,966 + HP15_2306 0.85 -0.5
2,428,966 + HP15_2306 0.85 +1.2
2,429,188 + +0.4
2,429,222 - HP15_2307 0.13 +0.5
2,429,374 - HP15_2307 0.25 -0.2
2,429,448 + HP15_2307 0.31 +0.6
2,429,480 + HP15_2307 0.33 +1.9
2,429,527 - HP15_2307 0.37 -1.6
2,429,763 + HP15_2307 0.56 +1.2
2,429,771 - HP15_2307 0.56 -0.3
2,429,776 - HP15_2307 0.57 +0.2
2,429,922 + HP15_2307 0.68 +0.8
2,429,965 + HP15_2307 0.72 +0.3
2,429,973 - HP15_2307 0.72 +0.6
2,430,002 + HP15_2307 0.75 +0.7
2,430,017 + HP15_2307 0.76 +0.9
2,430,040 - HP15_2307 0.78 +0.6
2,430,090 - HP15_2307 0.82 +0.3
2,430,175 - HP15_2307 0.88 -0.3
2,430,249 + +1.0
2,430,286 + +0.1
2,430,286 + +0.1
2,430,344 + +0.4
2,430,355 - +0.2
2,430,396 - HP15_2308 0.11 +0.3
2,430,707 + HP15_2308 0.48 -0.7
2,430,715 - HP15_2308 0.49 -0.4
2,430,933 + HP15_2308 0.74 +0.4
2,430,954 - HP15_2308 0.76 +0.1
2,430,956 + HP15_2308 0.77 -0.1
2,430,964 - HP15_2308 0.78 +0.1
2,431,261 + +0.4

Or see this region's nucleotide sequence