Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2305 and HP15_2306 are separated by 158 nucleotides HP15_2306 and HP15_2307 are separated by 2 nucleotides
HP15_2305: HP15_2305 - flagellar biosynthesis protein A, at 2,426,023 to 2,428,263
_2305
HP15_2306: HP15_2306 - uracil phosphoribosyltransferase, at 2,428,422 to 2,429,060
_2306
HP15_2307: HP15_2307 - xanthine/uracil permease, at 2,429,063 to 2,430,319
_2307
Position (kb)
2428
2429
2430 Strain fitness (log2 ratio)
-1
0
1
2 at 2427.484 kb on - strand, within HP15_2305 at 2427.509 kb on + strand, within HP15_2305 at 2427.514 kb on + strand, within HP15_2305 at 2427.579 kb on - strand, within HP15_2305 at 2427.605 kb on + strand, within HP15_2305 at 2427.674 kb on + strand, within HP15_2305 at 2427.706 kb on - strand, within HP15_2305 at 2427.765 kb on + strand, within HP15_2305 at 2427.765 kb on + strand, within HP15_2305 at 2427.773 kb on - strand, within HP15_2305 at 2427.841 kb on - strand, within HP15_2305 at 2427.853 kb on - strand, within HP15_2305 at 2427.859 kb on + strand, within HP15_2305 at 2427.859 kb on + strand, within HP15_2305 at 2427.867 kb on - strand, within HP15_2305 at 2427.869 kb on + strand, within HP15_2305 at 2427.948 kb on + strand, within HP15_2305 at 2427.969 kb on - strand, within HP15_2305 at 2427.979 kb on + strand, within HP15_2305 at 2427.979 kb on + strand, within HP15_2305 at 2427.989 kb on + strand, within HP15_2305 at 2428.064 kb on - strand at 2428.418 kb on + strand at 2428.426 kb on - strand at 2428.445 kb on - strand at 2428.533 kb on + strand, within HP15_2306 at 2428.533 kb on + strand, within HP15_2306 at 2428.591 kb on + strand, within HP15_2306 at 2428.599 kb on - strand, within HP15_2306 at 2428.619 kb on - strand, within HP15_2306 at 2428.688 kb on - strand, within HP15_2306 at 2428.966 kb on + strand, within HP15_2306 at 2428.966 kb on + strand, within HP15_2306 at 2429.188 kb on + strand at 2429.222 kb on - strand, within HP15_2307 at 2429.374 kb on - strand, within HP15_2307 at 2429.448 kb on + strand, within HP15_2307 at 2429.480 kb on + strand, within HP15_2307 at 2429.527 kb on - strand, within HP15_2307 at 2429.763 kb on + strand, within HP15_2307 at 2429.771 kb on - strand, within HP15_2307 at 2429.776 kb on - strand, within HP15_2307 at 2429.922 kb on + strand, within HP15_2307 at 2429.965 kb on + strand, within HP15_2307 at 2429.973 kb on - strand, within HP15_2307 at 2430.002 kb on + strand, within HP15_2307 at 2430.017 kb on + strand, within HP15_2307 at 2430.040 kb on - strand, within HP15_2307
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,427,484 - HP15_2305 0.65 +0.4 2,427,509 + HP15_2305 0.66 +0.4 2,427,514 + HP15_2305 0.67 -0.5 2,427,579 - HP15_2305 0.69 -0.4 2,427,605 + HP15_2305 0.71 +0.0 2,427,674 + HP15_2305 0.74 -0.0 2,427,706 - HP15_2305 0.75 -0.1 2,427,765 + HP15_2305 0.78 +0.5 2,427,765 + HP15_2305 0.78 +0.7 2,427,773 - HP15_2305 0.78 -0.7 2,427,841 - HP15_2305 0.81 -0.4 2,427,853 - HP15_2305 0.82 +0.6 2,427,859 + HP15_2305 0.82 -1.0 2,427,859 + HP15_2305 0.82 +0.1 2,427,867 - HP15_2305 0.82 -0.2 2,427,869 + HP15_2305 0.82 -0.1 2,427,948 + HP15_2305 0.86 -0.4 2,427,969 - HP15_2305 0.87 +0.4 2,427,979 + HP15_2305 0.87 -0.6 2,427,979 + HP15_2305 0.87 -0.5 2,427,989 + HP15_2305 0.88 -0.3 2,428,064 - -0.4 2,428,418 + +1.1 2,428,426 - +0.1 2,428,445 - +0.9 2,428,533 + HP15_2306 0.17 +1.0 2,428,533 + HP15_2306 0.17 -0.3 2,428,591 + HP15_2306 0.26 +0.6 2,428,599 - HP15_2306 0.28 +0.6 2,428,619 - HP15_2306 0.31 -0.1 2,428,688 - HP15_2306 0.42 -0.5 2,428,966 + HP15_2306 0.85 -0.5 2,428,966 + HP15_2306 0.85 +1.2 2,429,188 + +0.4 2,429,222 - HP15_2307 0.13 +0.5 2,429,374 - HP15_2307 0.25 -0.2 2,429,448 + HP15_2307 0.31 +0.6 2,429,480 + HP15_2307 0.33 +1.9 2,429,527 - HP15_2307 0.37 -1.6 2,429,763 + HP15_2307 0.56 +1.2 2,429,771 - HP15_2307 0.56 -0.3 2,429,776 - HP15_2307 0.57 +0.2 2,429,922 + HP15_2307 0.68 +0.8 2,429,965 + HP15_2307 0.72 +0.3 2,429,973 - HP15_2307 0.72 +0.6 2,430,002 + HP15_2307 0.75 +0.7 2,430,017 + HP15_2307 0.76 +0.9 2,430,040 - HP15_2307 0.78 +0.6
Or see this region's nucleotide sequence