Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2255 and HP15_2256 overlap by 9 nucleotides HP15_2256 and HP15_2257 are separated by 109 nucleotides HP15_2257 and HP15_2258 are separated by 29 nucleotides HP15_2258 and HP15_2259 overlap by 26 nucleotides
HP15_2255: HP15_2255 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 2,374,736 to 2,376,205
_2255
HP15_2256: HP15_2256 - hypothetical protein, at 2,376,197 to 2,376,316
_2256
HP15_2257: HP15_2257 - transcription-repair-coupling factor, at 2,376,426 to 2,379,959
_2257
HP15_2258: HP15_2258 - 5'-methylthioadenosine phosphorylase, at 2,379,989 to 2,380,816
_2258
HP15_2259: HP15_2259 - methylthioadenosine phosphorylase, at 2,380,791 to 2,381,579
_2259
Position (kb)
2376
2377
2378
2379
2380 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2376.428 kb on + strand at 2376.469 kb on - strand at 2376.469 kb on - strand at 2376.581 kb on - strand at 2376.581 kb on - strand at 2376.581 kb on - strand at 2376.728 kb on - strand at 2376.763 kb on - strand at 2376.820 kb on + strand, within HP15_2257 at 2376.869 kb on + strand, within HP15_2257 at 2376.919 kb on + strand, within HP15_2257 at 2377.039 kb on + strand, within HP15_2257 at 2377.047 kb on - strand, within HP15_2257 at 2377.097 kb on + strand, within HP15_2257 at 2377.105 kb on - strand, within HP15_2257 at 2377.128 kb on - strand, within HP15_2257 at 2377.189 kb on + strand, within HP15_2257 at 2377.300 kb on + strand, within HP15_2257 at 2377.316 kb on - strand, within HP15_2257 at 2377.376 kb on + strand, within HP15_2257 at 2377.484 kb on + strand, within HP15_2257 at 2377.492 kb on - strand, within HP15_2257 at 2377.562 kb on - strand, within HP15_2257 at 2377.629 kb on - strand, within HP15_2257 at 2377.657 kb on - strand, within HP15_2257 at 2377.716 kb on - strand, within HP15_2257 at 2377.770 kb on - strand, within HP15_2257 at 2377.785 kb on - strand, within HP15_2257 at 2377.791 kb on + strand, within HP15_2257 at 2377.798 kb on + strand, within HP15_2257 at 2378.006 kb on - strand, within HP15_2257 at 2378.055 kb on - strand, within HP15_2257 at 2378.219 kb on - strand, within HP15_2257 at 2378.238 kb on + strand, within HP15_2257 at 2378.305 kb on + strand, within HP15_2257 at 2378.351 kb on - strand, within HP15_2257 at 2378.360 kb on + strand, within HP15_2257 at 2378.360 kb on + strand, within HP15_2257 at 2378.527 kb on + strand, within HP15_2257 at 2378.527 kb on + strand, within HP15_2257 at 2378.535 kb on - strand, within HP15_2257 at 2378.535 kb on - strand, within HP15_2257 at 2378.568 kb on + strand, within HP15_2257 at 2378.571 kb on - strand, within HP15_2257 at 2378.706 kb on - strand, within HP15_2257 at 2378.752 kb on + strand, within HP15_2257 at 2378.797 kb on - strand, within HP15_2257 at 2378.843 kb on - strand, within HP15_2257 at 2378.933 kb on + strand, within HP15_2257 at 2378.936 kb on - strand, within HP15_2257 at 2378.941 kb on - strand, within HP15_2257 at 2378.989 kb on - strand, within HP15_2257 at 2379.016 kb on + strand, within HP15_2257 at 2379.177 kb on - strand, within HP15_2257 at 2379.221 kb on + strand, within HP15_2257 at 2379.311 kb on + strand, within HP15_2257 at 2379.363 kb on + strand, within HP15_2257 at 2379.389 kb on - strand, within HP15_2257 at 2379.414 kb on - strand, within HP15_2257 at 2379.439 kb on - strand, within HP15_2257 at 2379.445 kb on - strand, within HP15_2257 at 2379.777 kb on + strand at 2379.800 kb on + strand at 2379.825 kb on + strand at 2379.833 kb on - strand at 2379.923 kb on + strand at 2380.798 kb on + strand at 2380.820 kb on + strand at 2380.828 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,376,428 + -0.1 2,376,469 - +1.1 2,376,469 - +0.5 2,376,581 - +0.5 2,376,581 - +0.1 2,376,581 - +0.7 2,376,728 - +0.6 2,376,763 - +0.6 2,376,820 + HP15_2257 0.11 +0.3 2,376,869 + HP15_2257 0.13 +0.2 2,376,919 + HP15_2257 0.14 +0.3 2,377,039 + HP15_2257 0.17 +0.3 2,377,047 - HP15_2257 0.18 +0.8 2,377,097 + HP15_2257 0.19 +0.6 2,377,105 - HP15_2257 0.19 +0.4 2,377,128 - HP15_2257 0.20 +1.3 2,377,189 + HP15_2257 0.22 +0.9 2,377,300 + HP15_2257 0.25 +0.1 2,377,316 - HP15_2257 0.25 -0.1 2,377,376 + HP15_2257 0.27 +0.1 2,377,484 + HP15_2257 0.30 +0.6 2,377,492 - HP15_2257 0.30 +0.1 2,377,562 - HP15_2257 0.32 +0.7 2,377,629 - HP15_2257 0.34 +0.8 2,377,657 - HP15_2257 0.35 +0.3 2,377,716 - HP15_2257 0.37 +0.6 2,377,770 - HP15_2257 0.38 +0.4 2,377,785 - HP15_2257 0.38 +0.8 2,377,791 + HP15_2257 0.39 +0.9 2,377,798 + HP15_2257 0.39 -0.5 2,378,006 - HP15_2257 0.45 +0.7 2,378,055 - HP15_2257 0.46 +0.7 2,378,219 - HP15_2257 0.51 +0.4 2,378,238 + HP15_2257 0.51 +0.4 2,378,305 + HP15_2257 0.53 +0.5 2,378,351 - HP15_2257 0.54 +1.7 2,378,360 + HP15_2257 0.55 +0.8 2,378,360 + HP15_2257 0.55 +0.6 2,378,527 + HP15_2257 0.59 +0.9 2,378,527 + HP15_2257 0.59 +0.6 2,378,535 - HP15_2257 0.60 +0.3 2,378,535 - HP15_2257 0.60 +0.6 2,378,568 + HP15_2257 0.61 -0.1 2,378,571 - HP15_2257 0.61 +0.4 2,378,706 - HP15_2257 0.65 +0.8 2,378,752 + HP15_2257 0.66 +1.0 2,378,797 - HP15_2257 0.67 +1.5 2,378,843 - HP15_2257 0.68 +1.4 2,378,933 + HP15_2257 0.71 +0.6 2,378,936 - HP15_2257 0.71 -0.0 2,378,941 - HP15_2257 0.71 +0.7 2,378,989 - HP15_2257 0.73 +0.7 2,379,016 + HP15_2257 0.73 +0.5 2,379,177 - HP15_2257 0.78 +0.7 2,379,221 + HP15_2257 0.79 +1.0 2,379,311 + HP15_2257 0.82 +0.6 2,379,363 + HP15_2257 0.83 +0.8 2,379,389 - HP15_2257 0.84 +1.0 2,379,414 - HP15_2257 0.85 +1.3 2,379,439 - HP15_2257 0.85 -0.1 2,379,445 - HP15_2257 0.85 +0.4 2,379,777 + +0.6 2,379,800 + +0.6 2,379,825 + -0.2 2,379,833 - +0.8 2,379,923 + -0.6 2,380,798 + +0.3 2,380,820 + +0.3 2,380,828 - -3.3
Or see this region's nucleotide sequence