Experiment: m.b. Aluminum chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2230 and HP15_2231 are separated by 101 nucleotides HP15_2231 and HP15_2232 are separated by 99 nucleotides HP15_2232 and HP15_2233 are separated by 115 nucleotides
HP15_2230: HP15_2230 - phosphotransferase YdiA, at 2,347,986 to 2,348,801
_2230
HP15_2231: HP15_2231 - pitrilysin metallopeptidase 1, at 2,348,903 to 2,351,827
_2231
HP15_2232: HP15_2232 - conserved hypothetical protein, membrane, at 2,351,927 to 2,352,388
_2232
HP15_2233: HP15_2233 - MORN repeat protein, at 2,352,504 to 2,353,817
_2233
Position (kb)
2348
2349
2350
2351
2352 Strain fitness (log2 ratio)
-1
0
1
2 at 2347.964 kb on + strand at 2347.972 kb on - strand at 2348.031 kb on + strand at 2348.085 kb on - strand, within HP15_2230 at 2348.102 kb on - strand, within HP15_2230 at 2348.167 kb on + strand, within HP15_2230 at 2348.280 kb on - strand, within HP15_2230 at 2348.344 kb on + strand, within HP15_2230 at 2348.352 kb on - strand, within HP15_2230 at 2348.538 kb on + strand, within HP15_2230 at 2348.666 kb on + strand, within HP15_2230 at 2348.726 kb on + strand at 2348.756 kb on - strand at 2348.796 kb on + strand at 2348.960 kb on + strand at 2349.188 kb on - strand at 2349.272 kb on - strand, within HP15_2231 at 2349.301 kb on - strand, within HP15_2231 at 2349.301 kb on - strand, within HP15_2231 at 2349.415 kb on - strand, within HP15_2231 at 2349.427 kb on - strand, within HP15_2231 at 2349.474 kb on - strand, within HP15_2231 at 2349.595 kb on + strand, within HP15_2231 at 2349.637 kb on + strand, within HP15_2231 at 2349.750 kb on + strand, within HP15_2231 at 2349.771 kb on + strand, within HP15_2231 at 2349.779 kb on - strand, within HP15_2231 at 2349.819 kb on + strand, within HP15_2231 at 2349.875 kb on + strand, within HP15_2231 at 2349.883 kb on - strand, within HP15_2231 at 2349.959 kb on + strand, within HP15_2231 at 2350.008 kb on + strand, within HP15_2231 at 2350.008 kb on + strand, within HP15_2231 at 2350.057 kb on - strand, within HP15_2231 at 2350.156 kb on + strand, within HP15_2231 at 2350.313 kb on - strand, within HP15_2231 at 2350.591 kb on + strand, within HP15_2231 at 2350.638 kb on + strand, within HP15_2231 at 2350.695 kb on + strand, within HP15_2231 at 2350.695 kb on + strand, within HP15_2231 at 2350.703 kb on - strand, within HP15_2231 at 2350.705 kb on + strand, within HP15_2231 at 2350.739 kb on - strand, within HP15_2231 at 2350.747 kb on + strand, within HP15_2231 at 2350.826 kb on + strand, within HP15_2231 at 2350.882 kb on + strand, within HP15_2231 at 2350.995 kb on + strand, within HP15_2231 at 2350.995 kb on + strand, within HP15_2231 at 2351.005 kb on + strand, within HP15_2231 at 2351.005 kb on + strand, within HP15_2231 at 2351.005 kb on + strand, within HP15_2231 at 2351.005 kb on + strand, within HP15_2231 at 2351.005 kb on + strand, within HP15_2231 at 2351.008 kb on - strand, within HP15_2231 at 2351.010 kb on + strand, within HP15_2231 at 2351.010 kb on + strand, within HP15_2231 at 2351.013 kb on - strand, within HP15_2231 at 2351.013 kb on - strand, within HP15_2231 at 2351.013 kb on - strand, within HP15_2231 at 2351.018 kb on - strand, within HP15_2231 at 2351.018 kb on - strand, within HP15_2231 at 2351.092 kb on + strand, within HP15_2231 at 2351.287 kb on + strand, within HP15_2231 at 2351.287 kb on + strand, within HP15_2231 at 2351.495 kb on + strand, within HP15_2231 at 2351.495 kb on + strand, within HP15_2231 at 2351.495 kb on + strand, within HP15_2231 at 2351.503 kb on - strand, within HP15_2231 at 2351.622 kb on - strand at 2351.748 kb on - strand at 2351.800 kb on - strand at 2351.905 kb on + strand at 2351.905 kb on - strand at 2351.914 kb on - strand at 2351.921 kb on - strand at 2352.056 kb on - strand, within HP15_2232 at 2352.144 kb on + strand, within HP15_2232 at 2352.165 kb on + strand, within HP15_2232 at 2352.353 kb on - strand at 2352.442 kb on - strand at 2352.562 kb on - strand at 2352.692 kb on + strand, within HP15_2233 at 2352.705 kb on - strand, within HP15_2233 at 2352.711 kb on + strand, within HP15_2233 at 2352.775 kb on + strand, within HP15_2233 at 2352.775 kb on + strand, within HP15_2233
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1 mM remove 2,347,964 + -0.0 2,347,972 - +0.0 2,348,031 + +0.1 2,348,085 - HP15_2230 0.12 +0.4 2,348,102 - HP15_2230 0.14 -0.9 2,348,167 + HP15_2230 0.22 -0.7 2,348,280 - HP15_2230 0.36 -0.2 2,348,344 + HP15_2230 0.44 +0.0 2,348,352 - HP15_2230 0.45 -0.5 2,348,538 + HP15_2230 0.68 -0.7 2,348,666 + HP15_2230 0.83 -0.0 2,348,726 + -1.0 2,348,756 - -0.1 2,348,796 + -0.5 2,348,960 + +1.0 2,349,188 - +1.1 2,349,272 - HP15_2231 0.13 +0.7 2,349,301 - HP15_2231 0.14 +0.7 2,349,301 - HP15_2231 0.14 +1.2 2,349,415 - HP15_2231 0.18 +1.0 2,349,427 - HP15_2231 0.18 +1.0 2,349,474 - HP15_2231 0.20 +2.0 2,349,595 + HP15_2231 0.24 +0.8 2,349,637 + HP15_2231 0.25 +0.9 2,349,750 + HP15_2231 0.29 +1.4 2,349,771 + HP15_2231 0.30 +0.4 2,349,779 - HP15_2231 0.30 +1.8 2,349,819 + HP15_2231 0.31 +1.2 2,349,875 + HP15_2231 0.33 +0.9 2,349,883 - HP15_2231 0.34 +1.1 2,349,959 + HP15_2231 0.36 +1.7 2,350,008 + HP15_2231 0.38 +0.5 2,350,008 + HP15_2231 0.38 +1.3 2,350,057 - HP15_2231 0.39 +1.1 2,350,156 + HP15_2231 0.43 +1.1 2,350,313 - HP15_2231 0.48 +1.0 2,350,591 + HP15_2231 0.58 -0.6 2,350,638 + HP15_2231 0.59 +1.1 2,350,695 + HP15_2231 0.61 +0.6 2,350,695 + HP15_2231 0.61 +0.9 2,350,703 - HP15_2231 0.62 +1.1 2,350,705 + HP15_2231 0.62 +1.5 2,350,739 - HP15_2231 0.63 +1.1 2,350,747 + HP15_2231 0.63 +1.5 2,350,826 + HP15_2231 0.66 +1.2 2,350,882 + HP15_2231 0.68 +2.3 2,350,995 + HP15_2231 0.72 +0.8 2,350,995 + HP15_2231 0.72 +1.3 2,351,005 + HP15_2231 0.72 +1.0 2,351,005 + HP15_2231 0.72 +0.5 2,351,005 + HP15_2231 0.72 +0.9 2,351,005 + HP15_2231 0.72 +1.2 2,351,005 + HP15_2231 0.72 +1.4 2,351,008 - HP15_2231 0.72 +1.0 2,351,010 + HP15_2231 0.72 +1.5 2,351,010 + HP15_2231 0.72 +0.9 2,351,013 - HP15_2231 0.72 +1.5 2,351,013 - HP15_2231 0.72 +0.7 2,351,013 - HP15_2231 0.72 +0.9 2,351,018 - HP15_2231 0.72 +1.6 2,351,018 - HP15_2231 0.72 +1.2 2,351,092 + HP15_2231 0.75 +0.4 2,351,287 + HP15_2231 0.82 +1.3 2,351,287 + HP15_2231 0.82 +0.4 2,351,495 + HP15_2231 0.89 +0.1 2,351,495 + HP15_2231 0.89 +1.6 2,351,495 + HP15_2231 0.89 +1.1 2,351,503 - HP15_2231 0.89 +0.7 2,351,622 - +1.0 2,351,748 - +1.0 2,351,800 - +1.3 2,351,905 + -0.4 2,351,905 - -0.1 2,351,914 - +1.4 2,351,921 - +0.2 2,352,056 - HP15_2232 0.28 +1.0 2,352,144 + HP15_2232 0.47 +0.3 2,352,165 + HP15_2232 0.52 -0.3 2,352,353 - +0.2 2,352,442 - -0.2 2,352,562 - -0.3 2,352,692 + HP15_2233 0.14 +0.3 2,352,705 - HP15_2233 0.15 -0.3 2,352,711 + HP15_2233 0.16 +1.1 2,352,775 + HP15_2233 0.21 -0.7 2,352,775 + HP15_2233 0.21 -0.6
Or see this region's nucleotide sequence